TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCACTATACCCATCTGGTCCTGGGCTTTTTTTGGTTGGCAAACT
ATTAATGACTCCTTCTATTTCTTTAGAGATTCTGGGACTGTTCAGATGGT
TAATCTGATCCTGCTTTAACTTTGGTACCTGGTATCTGCCTAAGAAATTG
TCCATTTCATCCAGGCTTTCCAGTTGTGTTGAGTATAGCTTTTTATAGTG
GGATCTGATGATTTTTTTGGATTTCCTTAATTTCCTACGTTATGTTTCCT
TTTTCATTTCTGATTTTGTTGATACTGTCTCTGAACCCTCTGGTTAGTCT
GACTAAAGGTTTATCTATGCTCTTGATTTTCTCAAAGAACCAGCTCCTGG
TTTGATTGATTCTTTGTATAGTTTGTTTTGTTTCTATTTGGTTGATTTCA
GACCTGAGTTTGATTATTTCCTGTCTTCTACTCTTCTTGGATCTATTTGC
TTCTTTTTGTTCCAGAGCTTTCAGGTGTGCTGTCAAGCTGCTAGTGTATG
CTCTCTTGCATTTCTTTTTGGAGGCACTCAGAGCTATGAGTTTTCCTCTT
AATACTGCTTTCATTATGCCCCAAAGTTTGGGTATTTTGTGGCTTCATTT
TCATTAAACTCTAAAAAGTCTTTAATTCTTTATTTCTTCCTTGACCAAGT
TATCATTGAGTAGAGTGTTGTTCAGCTT

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGTTTTAAACATAAGTTTGAGATGC
TTGTGGCATAGGTGATGAGAATAAATGAGTCCTTTGATAGACAAAAATTT
ACATGTTATTCTAAAATATAAATTGGTATGAAGTAACTTTCATTTGTGGA
ATACTGCCCAGTGGACCTTAACTTAAACAGTAGGTTTTTGGATGCAACAC
TGCTAAGCACAGGATCTGCACTGACTTCCATGCCTGCTGATTCAACTTTC
TCTTTAGCGCCTTTGTTAATGTGATATTGAAGAATTTTTTGAGATTAGAT
TCTGGTTATAATATAGTTATTTTATACATACGGTGTATGATGAAGCTATT
CTATCTTTTGAACTGTTATTGATATTTCCAAACCTCAGGTCATTGTATAT
ATTTCTAGAAGCAATTTCCTGCAACTAATAGCCATAATGACCAAAATTCC
TTGGAGTTTATGATAATGGAATTAAATTATTTCTGGCATGATTTATCACA
AGACTTGGCTAACAGTACTTTTAAGATATTGTTTACAAAACTTTTTCACA
TATGTCATCATATTCTAATTCTTTAGCAATCCTTCAGGTAAGCTGTATTT
TCAAGTTTTGTAAAAATCAAAGCTAAGATGTATTTAGTACAGTTATTAAG
ATTTTAGTGGTTCTCATTAGGTCTAG

Query= MSMg01no307_n08.g1 MSMg01no307_n08.g1 CHROMAT_FILE:
MSMg01no307_n08.g1 PHD_FILE: MSMg01no307_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:59 2005
         (651 letters)



>mm_chr19_18539073_18540122
          Length = 1050

 Score = 1151 bits (595), Expect = 0.0
 Identities = 637/651 (97%), Gaps = 1/651 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttttaaacataagtttgagatgcttgtggcataggtgatgagaataaatgagtccttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 agttttaaacataagtttgagatgcttgtggcataggtgatgagaataaatgagtccttt 791

                                                                       
Query: 61  gatagacaaaaatttacatgttattctaaaatataaattggtatgaagtaactttcattt 120
           ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 790 gatagacaaaaatctacatgttattctaaaatagaaattggtatgaagtaactttcattt 731

                                                                       
Query: 121 gtggaatactgcccagtggaccttaacttaaacagtaggtttttggatgcaacactgcta 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gtggaatactgcccagtggactttaacttaaacagtaggtttttggatgcaacactgcta 671

                                                                       
Query: 181 agcacaggatctgcactgacttccatgcctgctgattcaactttctctttagcgcctttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agcacaggatctgcactgacttccatgcctgctgattcaactttctctttagcgcctttg 611

                                                                       
Query: 241 ttaatgtgatattgaagaattttttgagattagattctggttataatatagttattttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttaatgtgatattgaagaattttttgagattagattctggttataatatagttattttat 551

                                                                       
Query: 301 acatacggtgtatgatgaagctattctatcttttgaactgttattgatatttccaaacct 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 acatacagtgtatgatgaagctattctatcttttgaactgttattgatatttccaaacct 491

                                                                       
Query: 361 caggtcattgtatatatttctagaagcaatttcctgcaactaatagccataatgaccaaa 420
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 490 caagtcattgtatatatttctagaagcaatttcctgcaactaatagctataatgaccaaa 431

                                                                       
Query: 421 attccttggagtttatgataatggaattaaattatttctggcatgatttatcacaagact 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 430 attccttggagtttatgataatggatttaaattatttctggcatgatttatgacaagact 371

                                                                       
Query: 481 tggctaacagtacttttaagatattgtttacaaaactttttcacatatgtcatcatattc 540
           ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 370 tggctaacagtacatttaagatattgtttacaaaagtttttcacatatgtcatcatattt 311

                                                                       
Query: 541 taattctttagcaatccttcaggtaagctgtattttcaagttttgtaaaaatcaaagcta 600
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 taattctttagcaatcct-caggtaagctgtattttcaagttttgtaaaaatcaaagcta 252

                                                              
Query: 601 agatgtatttagtacagttattaagattttagtggttctcattaggtctag 651
           |||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 251 agatgtctttagtatagttattaagattttagtggttctcattaggtctag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space:   666640
Effective search space used:   666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)