TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGGATTTTAGCATAGCACAGCAGACTAAGTTGGGATTCTGAGGATAGCT
GGGGGAAAAGCTTAACTATTGAAAGCATTGACCAGAAGGCCCAGATCTTC
AAAATCGCCTGCTTAGGTGTCAAAAACACATTCCTTGTGGAAACTGGTGT
GGTAAGTATAAGAGGAGTGGAATACTGGGGTAGCTAGCAGAGCCCTCGGG
AATGGGGAAGGATTCTCTTCCTCTTGTGTGGGGCCTTTTGGGAGCACTAC
CGTTCTGCCATTAGCTGCCAGTCAGAGCCAACCCCTGAGCCTCTATCTTC
CAGGAGTGATGGACATAGTTTCTAAAGCAGTGGTCTTTGAATCCCAAGGA
AATTGTTCTGTGGCCCACCCAAGACATGGGATTCCCCCCAGTGGTCATAA
CTCTTCTGGCTTCCCAAACCCTTGCTATGAACCAAACCTAAGGATCCAGT
GGGAAGTTGGAGGTTCATAACCCAGACAGGCAGCAGCTACTTCCCTTAAC
TTCAGGTGTGGATAGCACAGGCATATGCCTGGAGGAAACCTGTGGGCCAG
GTCTGAAAGAGCACCCTCTCCCCTGTCACTTGGAATGCCATCCCATAGAG
TCTCTGGGATCTTAGGGCAAGAAACTATCAAGTTCACAGGTCTCTCTCCT
AGATTCCCACTGCACACAGAAGCAGA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTGCCACTTCAGAGACCCAGAAAGT
CATAATGAGAGGTCTGTTAGCATGCCTAAGCTCATACCATTAATACATAT
GTAGAGAGACAAAGCTTGAACAAAGGTCATATGACTCAAACCTATGACAT
CTTCATTTCTATACCATGCTGCCACCCACTCTGTGTGTGTCTGTGTGTCT
GTGTGTCTGTGTGTCTGTGTGTCTGTGTGTCTGTGTCTGTGTCTGTATAT
AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGGT
GCTTGCTCATGAACTTGCCGTGGCACACATGTGGAGGTCAGAGGTCAAAT
CCTTTGGGAAGTTGGCCCTCAACTTCCATATCCTGTCTTAGTCAGGGTCT
CCCCTGTGCCTTATACTCCAGGCTGGCTGGCTCCCAAGCTTCTGGGTGAC
TCTCCTGTCCTTGAATCCTATCTCACAGGCGGTGTGTTGTGATTATAAAT
GAGATCCACCACATCTGACTTTTTACATGAATTCTGAGGATCAAACTCGG
CTTTCAGGATTGTGTTGCTCAAACCTTTTCCTGGAGATCCCACAAGAGTT
CTCATTTTTCTGTCTCTCTTACAAATGGCCACTCATTTCCATCCTCTTTC
AATGACCTGTAGAACCATCAAAACTATTATT

Query= MSMg01no316_m18.b1 MSMg01no316_m18.b1 CHROMAT_FILE:
MSMg01no316_m18.b1 PHD_FILE: MSMg01no316_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:38 2005
         (679 letters)



>mm_chr19_55317392_55318472
          Length = 1081

 Score = 1166 bits (603), Expect = 0.0
 Identities = 658/677 (97%), Gaps = 2/677 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctggattttagcatagcacagcagactaagttgggattctgaggatagctggggg 64
           |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 881 gaattctggattttaggatagcacagcagactaagttgggattctgaagatagctggggg 822

                                                                       
Query: 65  aaaagcttaactattgaaagcattgaccagaaggcccagatcttcaaaatcgcctgctta 124
           ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 821 aaaagcttaactattcaaagcattgaccagaaggcccagatcttcaaaagcgcctgctta 762

                                                                       
Query: 125 ggtgtcaaaaacacattccttgtggaaactggtgtggtaagtataagaggagtggaatac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ggtgtcaaaaacacattccttgtggaaactggtgtggtaagtataagaggagtggaatac 702

                                                                       
Query: 185 tggggtagctagcagagccctcgggaatggggaaggattctcttcctcttgtgtggggcc 244
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 701 tggggtagctagcagagccctcgggaatggggaaggattctcttcctcctgtgtggggcc 642

                                                                       
Query: 245 ttttgggagcactaccgttctgccattagctgccagtcagagccaacccctgagcctcta 304
           ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 641 tttcggaagcactaccgttctgccattagctgccagtcagagctaacccctgagcctcca 582

                                                                       
Query: 305 tcttccaggagtgatggacatagtttctaaagcagtggtctttgaatcccaaggaaattg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tcttccaggagtgatggacatagtttctaaagcagtggtctttgaatcccaaggaaattg 522

                                                                       
Query: 365 ttctgtggcccacccaagacatgggattccccccagtggtcataactcttctggcttccc 424
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttctgtggcaaacccaagacatgggattccccccagtggtcataactcttctggcttccc 462

                                                                       
Query: 425 aaacccttgctatgaaccaaacctaaggatccagtgggaagttggaggttcataacccag 484
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 461 aaacccttgctatgaaccaaacctaaagatccagtgggaagttggaggttcataacccag 402

                                                                       
Query: 485 acaggcagcagctacttcccttaacttcaggtgtggatagcacaggcatatgcctggagg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acaggcagcagctacttcccttaacttcaggtgtggatagcacaggcatatgcctggagg 342

                                                                       
Query: 545 aaacctgtgggccaggtctgaaagagcaccctctcccctgtcacttggaatgccatccca 604
           ||||||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 341 aaacctgtgagccaggtctgaaagagaactctctcccctgttacttggaatgccatccca 282

                                                                       
Query: 605 t--agagtctctgggatcttagggcaagaaactatcaagttcacaggtctctctcctaga 662
           |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttgagagtctttgggatcttagggcaagaaactatcaagttcacaggtctctctcctaga 222

                            
Query: 663 ttcccactgcacacaga 679
           |||||||||||||||||
Sbjct: 221 ttcccactgcacacaga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1081
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1071
Effective search space:   716499
Effective search space used:   716499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)