Query= MSMg01no317_b18.b1 MSMg01no317_b18.b1 CHROMAT_FILE:
MSMg01no317_b18.b1 PHD_FILE: MSMg01no317_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:03 2005
(679 letters)
>mm_chr19_26361293_26362371
Length = 1079
Score = 1199 bits (620), Expect = 0.0
Identities = 668/692 (96%), Gaps = 14/692 (2%)
Strand = Plus / Plus
Query: 1 ggctattcagagaaaccctggtctcgaaaagcc-------------aaaaaaaaaaaaaa 47
|||||| || ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 189 ggctatacaaagaaaccct-gtctcgaaaagccaaaaaaaaaaaaaaaaaaaaaaaaaaa 247
Query: 48 aaaaaaaaacggatccatctatcagatcagatcaattagttgagcattctgataggaagt 107
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 248 aaaaaaaaaaggatccatctatcagatcagatcaaatagttgagcattctgataggaagt 307
Query: 108 atttcagttgtactaacactctggtgagaatgcacagggaaaatcagtcatgcaaaagaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atttcagttgtactaacactctggtgagaatgcacagggaaaatcagtcatgcaaaagaa 367
Query: 168 caacaattggcaaatgagtcattcaaaatgaagaagtttagaatagggactattggaccc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caacaattggcaaatgagtcattcaaaatgaagaagtttagaatagggactattggaccc 427
Query: 228 acagacaggaaagcaatatatgctatcataaaataataaagaccatggtcattctttctt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acagacaggaaagcaatatatgctatcataaaataataaagaccatggtcattctttctt 487
Query: 288 ttatataatctctccattaggcaaaatgaagcatgctcttgatttataaagtttcccatg 347
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 488 ttatataatctctctattaggcaaaatgaagcatgctcttgatttagaaagtttcccatg 547
Query: 348 tacttttgtcaacttgattcagcctggattgaggaattacctagtcagattgatctgtga 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tacttttgtcaacttgattcagcctggattgaggaattacctagtcagattgatctgtga 607
Query: 408 gcatgcctgtgtcttaattgattgctttgattattttcttgattgttgattgatacagtg 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gcatgcctgtgtcttaattgattgctttgattattttcttgattgttgattgatacagtg 667
Query: 468 ggactcagactactgtggacaacaccattccacagatacctactcctggaataaaatata 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ggactcagactactgtggacaacaccattccacagatacctactcctggaataaaatata 727
Query: 528 agaaggccaattaagcatgagccctcaagaaagccagaaaacatcactgccccatggttt 587
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 728 agaaggccaattaagcatgagccctcaagagagccagaaaacatcactgccccatggttt 787
Query: 588 ctgctttgaattcctgccctgacttctctcagtgaagaactatgacctgcaagcataaga 647
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 788 ctgctttgaattcctgccttgacttctctcagtgaagaactatgacctgcgagcataaga 847
Query: 648 aaaataagttctcggttgcttttgcttataat 679
||||||||||||| ||||||||||||||||||
Sbjct: 848 aaaataagttctcagttgcttttgcttataat 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_b18.g1 MSMg01no317_b18.g1 CHROMAT_FILE:
MSMg01no317_b18.g1 PHD_FILE: MSMg01no317_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:03 2005
(673 letters)
>mm_chr19_26435759_26436831
Length = 1073
Score = 903 bits (467), Expect = 0.0
Identities = 479/483 (99%)
Strand = Plus / Minus
Query: 1 actagatattagaataactcccgagccacttggtgcctaagccacaacccaggattccag 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 483 actagatattagaataactcccgagccacttggtgcctaagccacaagccaggattccag 424
Query: 61 aatgcttaaagcttcagcatttgttacctacagagaatgacattcttgatgagaccattc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 423 aatgcttaaagcttcagcatttgttacctacagagaatgacattcttgatgacaccattt 364
Query: 121 ccttgtgacaagaaacaagggagcagataaataacattaaatatctgtgtgggaagaagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcttgtgacaagaaacaagggagcagataaataacattaaatatctgtgtgggaagaagt 304
Query: 181 atacacaaaactagagtattctcttataagactattagaatatatgtgtataataaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atacacaaaactagagtattctcttataagactattagaatatatgtgtataataaaact 244
Query: 241 tacttaagatttcagtaatgctagacagagaggttctagagctcttttgcacttgtgacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tacttaagatttcagtaatgctagacagagaggttctagagctcttttgcacttgtgacc 184
Query: 301 ctttctttgcctgataaatttttacatgaccccaggtatatatgtatataaaataggtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctttctttgcctgataaatttttacatgaccccaggtatatatgtatataaaataggtat 124
Query: 361 acaaatcaaacatttactgataataaatttatttcagagagtgggagtgatagctcagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 acaaatcaaacatttactgataataaatttatttcagagagtgggagtgatagctcagtg 64
Query: 421 gttaagggccctggctgctctggttcaatttccagcaaccacatggtgactcacaaccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gttaagggccctggctgctctggttcaatttccagcaaccacatggtgactcacaaccac 4
Query: 481 ctg 483
|||
Sbjct: 3 ctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
