Query= MSMg01no317_h05.b1 MSMg01no317_h05.b1 CHROMAT_FILE:
MSMg01no317_h05.b1 PHD_FILE: MSMg01no317_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:28 2005
(345 letters)
>mm_chr19_3920564_3921308
Length = 745
Score = 634 bits (328), Expect = 0.0
Identities = 340/344 (98%)
Strand = Plus / Plus
Query: 1 gctgtggaggctggagccaccccagagccttacctgtgaagaagatgtacccgaacttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 gctgtggaggctggagccaccccagagccttacctgtgaagaagatgtagtcgaacttgt 260
Query: 61 gttccagcagctgcccggtctcctgaggcccacccagtaccacagtaaagcagctctgtg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 gttccagcagctgcccggtctcctgacgcccacccagtaccacagtaaagcagctctgtg 320
Query: 121 ggggcgggggcaggcaaaggtcctcagacccagcttctgagtccaccctgcctggagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggcgggggcaggcaaaggtcctcagacccagcttctgagtccaccctgcctggagccc 380
Query: 181 acccactttgcctcttcacccaggcatagacaatccttcctgagaacttcctggggcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccactttgcctcttcacccaggcatagacaatccttcctgagaacttcctggggcagg 440
Query: 241 gaatggctgaacactagaccaagagatgaaatgatgctgggaccagctatgggagggata 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gaatggctgaacactagaccaagagataaaatgatgctgggaccagctatgggagggata 500
Query: 301 tcaggggacagactacacaggctagatcctagaaggggagctgg 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaggggacagactacacaggctagatcctagaaggggagctgg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_h05.g1 MSMg01no317_h05.g1 CHROMAT_FILE:
MSMg01no317_h05.g1 PHD_FILE: MSMg01no317_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:28 2005
(254 letters)
>mm_chr19_4112090_4112743
Length = 654
Score = 491 bits (254), Expect = e-143
Identities = 254/254 (100%)
Strand = Plus / Minus
Query: 1 agggcaggttaggaccatcctaagccacagtacctcttgcaccaggctctgcagaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agggcaggttaggaccatcctaagccacagtacctcttgcaccaggctctgcagaaacat 395
Query: 61 ggctttctgccgcagcgggtcgtgggtgaggccatcacagaaggagacaacaccatgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggctttctgccgcagcgggtcgtgggtgaggccatcacagaaggagacaacaccatgggg 335
Query: 121 gaagttgtgttgcgacagccaggccactacacggtgcttttgcatgtcaggccggccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaagttgtgttgcgacagccaggccactacacggtgcttttgcatgtcaggccggccagt 275
Query: 181 tacatacacaatcaagtagccagagtcctgccagtgcctgtgagatggaggcttgtcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tacatacacaatcaagtagccagagtcctgccagtgcctgtgagatggaggcttgtcagc 215
Query: 241 tccagtccacaggg 254
||||||||||||||
Sbjct: 214 tccagtccacaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
