Query= MSMg01no321_l18.b1 MSMg01no321_l18.b1 CHROMAT_FILE:
MSMg01no321_l18.b1 PHD_FILE: MSMg01no321_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:32 2005
(295 letters)
>mm_chr19_4689357_4690052
Length = 696
Score = 503 bits (260), Expect = e-147
Identities = 287/296 (96%), Gaps = 1/296 (0%)
Strand = Plus / Minus
Query: 1 tcatctttatcccttacttgctgggaataatccagctcctactgtcctcactctctggct 60
||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 496 tcatcttcatcccttacttgctgggaataatccagctccttctgtcctcactctttggct 437
Query: 61 tcttctgtctggataatcttctgatatttctctaagtgaactcatactttattctaggtt 120
||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 436 tcttctgtctggatattcttccgatatttctctaagtggactcatactttattctaggtt 377
Query: 121 aataaacagtggaccaaggcaactccctagtgtcctacctgtttcagcttcttttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aataaacagtggaccaaggcaactccctagtgtcctacctgtttcagcttcttttctttt 317
Query: 181 tatcctttttcagttcctaacaattcatgctttaaatcagcaaacttttgttgactgtct 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tatcctttttcagttcctaacgattcatgctttaaatcagcaaacttttgttgactgtct 257
Query: 241 ccttgccgtgaattgacaggaagggaagacagctctgaaaataaaatg-ggtgtta 295
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 256 ccttgccgtgaagtgacaggaagggaagacagctctgaaaataaaatgtggtgtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 696
Length adjustment: 9
Effective length of query: 286
Effective length of database: 687
Effective search space: 196482
Effective search space used: 196482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_l18.g1 MSMg01no321_l18.g1 CHROMAT_FILE:
MSMg01no321_l18.g1 PHD_FILE: MSMg01no321_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:32 2005
(287 letters)
>mm_chr19_4521047_4521733
Length = 687
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%)
Strand = Plus / Plus
Query: 1 agaagctcctgaataaggaaacaattatgagactcatgttactttcttacgaaacttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 agaagctcctgaataaggaaacaattatgagactcatgttactttcttaagaaacttttg 260
Query: 61 gtatttcccctgaaactggatattttccctatgatttagggacccttggcccagatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatttcccctgaaactggatattttccctatgatttagggacccttggcccagatgaaa 320
Query: 121 ttaggtcttagcttttgaacatagctatgaagcagatctgtgattcactatcattgggcc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ttaggtcttagcttttgaacatagctatgaagcaaatctgtgattcactatcattgggcc 380
Query: 181 ctgcttaaacaccattgcttaatttcctctcctgtatctccacttctctaccagatgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcttaaacaccattgcttaatttcctctcctgtatctccacttctctaccagatgctg 440
Query: 241 aaaccataaactggatttgatttatatacttacagctttctttccta 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaccataaactggatttgatttatatacttacagctttctttccta 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
