Query= MSMg01no321_p12.b1 MSMg01no321_p12.b1 CHROMAT_FILE:
MSMg01no321_p12.b1 PHD_FILE: MSMg01no321_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:49 2005
(350 letters)
>mm_chr19_8638326_8639075
Length = 750
Score = 642 bits (332), Expect = 0.0
Identities = 344/348 (98%)
Strand = Plus / Minus
Query: 1 gctctcaagccatgtggcctgtagctagttcctgtactgtactagagcacccacctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctctcaagccatgtggcctgtagctagttcctgtactgtactagagcacccacctcctg 322
Query: 61 gggaaaatgttataaaaattaggtctttcttccttttctcccatgaaactctattgtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaaatgttataaaaattaggtctttcttccttttctcccatgaaactctattgtgta 262
Query: 121 aaccttcctgccagctcattgggagcagagagtctttccacatggaagcacacacatgaa 180
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aaccttcctgccagctcattaggagcagagaatctttccacatggaagcacacacatgaa 202
Query: 181 tacagtctatcatagtttcagaaatgtttaaagtccaacgttcaaagtctcttcagagat 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacagtctatcatagtctcagaaatgtttaaagtccaacgttcaaagtctcttcagagat 142
Query: 241 tcacacaatcccttcattgtaatctcctataaaaatcacaataaaaaagcagaccacaca 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 141 tcacacaatcccttcattgtaatctcctataaaaatcaaaataaaaaagcagaccacaca 82
Query: 301 cttccaacatcccaggagacacattactattttaaaatgtcataatga 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cttccaacatcccaggagacacattactattttaaaatgtcataatga 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_p12.g1 MSMg01no321_p12.g1 CHROMAT_FILE:
MSMg01no321_p12.g1 PHD_FILE: MSMg01no321_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:49 2005
(248 letters)
>mm_chr19_8472525_8473172
Length = 648
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Plus
Query: 1 agttttccattgttcatgtatactgttcttgattgatttagttgtttacctttagtactc 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 agttttccattgttcatgtatactgttcttgattgatttagttgtttaaatttagtactc 260
Query: 61 tgtgacttcggtggctttatttaccagttcttttaaaaaacattctttgttttatttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgacttcggtggctttatttaccagttcttttaaaaaacattctttgttttatttctt 320
Query: 121 cacttgtagacagactatattgtgtattgtatagatgtatcacctgtcaattaaaaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacttgtagacagactatattgtgtattgtatagatgtatcacctgtcaattaaaaagcc 380
Query: 181 tatcgcctatggcttaggcaagaaataagagttagacatatgacagagagagagaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcgcctatggcttaggcaagaaataagagttagacatatgacagagagagagaaagga 440
Query: 241 ttcagg 246
||||||
Sbjct: 441 ttcagg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
