Query= MSMg01no322_p22.b1 MSMg01no322_p22.b1 CHROMAT_FILE:
MSMg01no322_p22.b1 PHD_FILE: MSMg01no322_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:04 2005
(650 letters)
>mm_chr19_26499811_26500860
Length = 1050
Score = 1114 bits (576), Expect = 0.0
Identities = 633/654 (96%), Gaps = 6/654 (0%)
Strand = Plus / Plus
Query: 1 aattttggtgagtggtgcctgtcttgtttgaatgcatctctgattaagcttcttgcccac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattttgatgagtggtgcctgtcttgtttgaatgcatctctgattaagcttcttgcccac 260
Query: 61 acatccccaacaggatcacatgaagggggatcaggctgtatcacttcactcagtccagag 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatccccaacaatatcacatgaagggggatcaggctgtatcacttcactcagtccagag 320
Query: 121 acaaag-atgccaactttttcctgaggtcctaggttgggagtgtttctcttttactactc 179
|||| | ||| |||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 321 acaa-gcatgtcaactttttcctaaggttctaggttgggagtgtttctcttttactactc 379
Query: 180 agccttttaagatttctttccttgtgcccctttctcctaatccacaatggaagaggggtt 239
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 380 agccttttaagatttctttccttgtgtccctttctcctaatccacaatggaaaaggggtt 439
Query: 240 ctctttcaacagagcagatatccttatgtctcggtaagagctactattgctgcgagaaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctctttcaacagagcagatatccttatgtctcggtaagagctactattgctgcgagaaaa 499
Query: 300 cactatgaccaaaaacaaactggagagaaaaga----atttggctcccacttctgcatca 355
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 cactatgaccaaaaacaaactggagagaaaagagtttatttggctcccacttctgcatca 559
Query: 356 cagtgcatcatcaaaggtagttgaggtcaggaactcaaacacaggaacctggagacaggg 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 cagtgcatcatcaaaggtagttgaggtcaggaactcaaacacaggaacctggaggcaggg 619
Query: 416 gctcatgcagaggccatggagtagagctgcttactggcttgctccttagagtttgtttgc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gctcatgcagaggccatggagtagagctgcttactggcttgctccttagagtttgtttgc 679
Query: 476 tcagtcagttttcttataggacccaggaccactagcccagggtagtatcacccataatgg 535
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcagtcagctttcttataggacccaggaccactagcccagggtagtatcacccataatgg 739
Query: 536 ggtgggtatgcccttcctccaacatcaatctctaatttaaaaaatcctctacaggcttgc 595
|||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||
Sbjct: 740 ggtgggtatgcccttcctccaacatcaatcactaattcaaaaattcctctacaggtttgc 799
Query: 596 ctacatcccaatcttatggtggcattttctcaattgaagttccctcctcttggt 649
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctacaccccaatcttatggtggcattttctcaattgaagttccctcctcttggt 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_p22.g1 MSMg01no322_p22.g1 CHROMAT_FILE:
MSMg01no322_p22.g1 PHD_FILE: MSMg01no322_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:04 2005
(338 letters)
>mm_chr19_26662312_26663049
Length = 738
Score = 561 bits (290), Expect = e-164
Identities = 326/338 (96%)
Strand = Plus / Minus
Query: 1 aaagagctggttggtagttatgttctaagattccagggacagtcattccttttccagagt 60
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 538 aaagagctggttggtagttaggttctaagattccagggacagtcgctccttttccagagt 479
Query: 61 agtagaaaacagagcatagaaaagttgaataacttgactgtggtcaagcaagaagtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agtagaaaacagagcatagaaaagttgaataacttgactgtggtcaagcaagaagtcatt 419
Query: 121 cctagagataaaactacatctcaggacaatacgaattggaaacataataagccttttggc 180
|||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| |
Sbjct: 418 cctagagataaagctacatcccaggacaatacgaattggaagcataataagccttttgac 359
Query: 181 catcatgctttgcatttatgaagactaaagtgccctgataaagcccggggtcacattttg 240
||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 358 catcatgctttgcatgtatgaagactaaagtgccctgataaagcctggggccacattttg 299
Query: 241 gaactttttactgcttacagctgagacctcaaacatcatgtgacagatcctacagcttga 300
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 298 gaactttttactgcttgcagctgagacctcaaacatcatgtgacagatcctccagcttga 239
Query: 301 gattgcttcacattggtctctcctgtgatacggtgaag 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gattgcttcacattggtctctcctgtgatacggtgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
