Query= MSMg01no325_a04.b1 MSMg01no325_a04.b1 CHROMAT_FILE:
MSMg01no325_a04.b1 PHD_FILE: MSMg01no325_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:28 2005
(372 letters)
>mm_chr19_17810325_17811098
Length = 774
Score = 692 bits (358), Expect = 0.0
Identities = 368/372 (98%), Gaps = 2/372 (0%)
Strand = Plus / Plus
Query: 3 ggaattcaattaattgttgcatgaataaaatcattatcaatttactttttttcttcccat 62
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 203 ggaattcaattaattgttgaatgaataaaatcattaccaatttactttttttcttcccat 262
Query: 63 ggtttcacaatttgttgctttcctccattttccatcctgctacacattaaattaatgcct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggtttcacaatttgttgctttcctccattttccatcctgctacacattaaattaatgcct 322
Query: 123 ttattgaacagtctgcagtaactcttagttttccgtcctgggaggacagaacaagctcag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttattgaacagtctgcagtaactcttagttttccgtcctgggaggacagaacaagctcag 382
Query: 183 cgctcattagtgtgcgtgcccagttcaaatgatttgtctgctgcacactccctttcacgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cgctcattagtgtgcgtgcccagttcaaatgatttgtctgctgcacactccctttcacgc 442
Query: 243 tccagaatggtctggtctgatcgttacagagctctttaatctttcattttcttagactaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccagaatggtctggtctgatcgttacagagctctttaatctttcattttcttagactaa 502
Query: 303 gctctacaaatggcaatgtttcttgtcctgttttacttcatccttcaatttaaaaaaaa- 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gctctacaaatggcaatgtttcttgtcctgttttacttcatccttcaatttaaaaaaaaa 562
Query: 362 -tgaaaggcaag 372
|||||||||||
Sbjct: 563 atgaaaggcaag 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 774
Length adjustment: 9
Effective length of query: 363
Effective length of database: 765
Effective search space: 277695
Effective search space used: 277695
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_a04.g1 MSMg01no325_a04.g1 CHROMAT_FILE:
MSMg01no325_a04.g1 PHD_FILE: MSMg01no325_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:28 2005
(341 letters)
>mm_chr19_17966014_17966754
Length = 741
Score = 582 bits (301), Expect = e-170
Identities = 330/341 (96%), Gaps = 3/341 (0%)
Strand = Plus / Minus
Query: 1 tattatgtctagggtatattaaaggtttgtattaattcatcatggggaaaatctggccta 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 419 tattatgtctagggtatattaaaggtttgtattaagtcatcatggggaaaatctggccta 360
Query: 61 ctgattgcttttgcaaatgaagttttactggcattcagctacattcactcatttttgcat 120
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 359 ctgattgcttttgcaaatgaagttttactggcattcagatatattcactcatttttgcat 300
Query: 121 ttagcaccaccgcagaaatgttaaggaattgtcacagagactatctggtcacaagacctg 180
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 299 ttagcaccacagcataaatgttaaggaattgtcacagagactatctggtcacaagatctg 240
Query: 181 actgacatactattgttgggcccctgaccttttctaaaaaaaaaggtgtttatggtggta 240
|||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||
Sbjct: 239 actgacatactattgttgggcccctgacctttcctaaaaca---ggtgtttatggtggta 183
Query: 241 gcatcaattttaaatctcagaattcagagggctaaggcaggaggattgtgatgagttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcatcaattttaaatctcagaattcagagggctaaggcaggaggattgtgatgagttctg 123
Query: 301 ggtcagtgtagcctagataacaagactgtgtctccaacaag 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtcagtgtagcctagataacaagactgtgtctccaacaag 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
