CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTGATGGTCACTGTCCTCAGCAGTAAGAGTACTTACATGACCCT
TTAACATCAGTGACAATTTCTGTGGTTACTGTTAGGACATACAGTATCAG
GTGTGAGCTTCTATAACACACAACCAGCTCTAGGAAACAGAATTTTAAAT
TTTAATTTAATTTCATTTTTTGAGGCAGGGTCTCTACATAGCCTTGGCTG
TTCTGAGACTTGTTGCTAGCCTCAAACTCACACTGTATTTGTCATCAGAT
CACTGGACACCAGAAGACAGTATATCATCATATGATTTTATACCCAGCAA
AGCTAACATAGAAAGATACATTGTAGAATTAAGATTTTCTCAGACATGCG
AACACATATTCTTATTATTTTCTAATCTGGTTCTAATCCCTATCCCACCT
CAAACATTTAATTTATTTCTTCCTACAGAAGCTTTTAAAAATACCGTTAA
ACCAAAAATTTCTTCTGTTTCCCAAACTAATACTATTTAGAATAATCTTC
TTGTTATTTACTTTTGTTCTTTCCCCATTAATTTCCATTCATCTTTAAGA
ATGAATTACAAAGAAAAAATCTTATGTGTTCTTTTGCAAGGTATTACTAG
TTGGTGTTCATTCCTTTTATTTTGACCATTCATTTCCCCTATTTGGATGC
TGGTTGGGGCTTCCTTTGCTGAAGGN

CCTTTCGTCTTTTGGAGAGGCAACCCCCANNCCGCCTACAAACATATTTC
TATGTTTAGTTGAAGNNGNAAAAATNNTAAATGCGGTATTGATNGGNNNN
NNTNNGTTTTTCCAAAAAAGAGGGTGTNNAAAAAGGATATTGATTTTGGG
TAAGTTTTTGAATGTTTTAGCCGGTAGTTGTTTTGATGTGCGATAATTTT
TTGTGTAGGTTGTTTTTTTTTACATAGTGGCTGTGGGGATATCGGTGTTT
TTTTTATAATTGGTGAGAGGTATAGTTTGTTGTAAAAGATAAGGATTGTG
GGTTTGGAGTGTGTTTTGTGAGTTGGAAGGTAGAGTATATAAATAAGTGG
TGGTGTTTGTTTTTACTTGATTGGTGGAGGGGAGGGAAGGGAGTTTTTTT
TTTTTATATATAGGGGGAAGGCGAGGGGGGTTGGTATGGTGAAGATGTGG
ATCGGGCGGGGGAGGTTTAAGAGGGGGGAGTGGAAAGTATGATTATTGGT
TTGTTGTATCCCCCCCCGGGTTTAATGTTTAGTAAGATTGACTATAGAGG
GAGTGTGGGAGGAGTTATAGTTTGGTGTAAAGTTTTGGGATTGGTGAAGA
GTGGTGTAAGAAGTGGATGGATATTATTTGTGGTAATTGATACGGGTTTG
GGGGGGTTTAGGTATGGGAGTTTTGTGTTATGTGTTGGGTTTATGTGAAT
ACGTTATGGTTGTAGGGGGAGTTTTAGTAATAATTGTATTAGAGTTTATT
GTTGTTTTCGGAGTGGGAGGGCGGTGTTGGTGAGGGTATTTGGAGGAGTG
TATGGCGGTATATGAGTATGATGAGGAAGTAATATTATTTAGGTAGTGTT
GACGGGTTGGATTTAGTGGGAGAGATGTGGGGAGGGATGTGTGTGTGGGT
GGGTGGCTTGTTAGGTATGGGAATGATGTTGGGTGGGGTAGATTTG

Query= MSMg01no326_l17.b1 MSMg01no326_l17.b1 CHROMAT_FILE:
MSMg01no326_l17.b1 PHD_FILE: MSMg01no326_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:29 2005
         (679 letters)



>mm_chr19_56033848_56034927
          Length = 1080

 Score = 1145 bits (592), Expect = 0.0
 Identities = 664/706 (94%), Gaps = 31/706 (4%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtgatggtcactgtcctcagcagtaagagtacttacatgaccctttaacatca 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gaattcagtggtggtcactgtcctcagcagtaagagtacttacatgaccctttaacatca 234

                                                                       
Query: 65  gtgacaatttctgtggttactgttaggacatacagtatcaggtgtgagcttctataacac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 235 gtgacaatttctgtggttactgttaggacatacagtatcaggtgtgagcttctataacat 294

                                                                       
Query: 125 acaaccagctctaggaaacagaattttaaattttaatttaatttcattttttgaggcagg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 acaaccagctctaggaaacagaattttaaattttaatttaatttcattttttgaggcagg 354

                                                                       
Query: 185 gtctctacatagccttggctgttctgagacttgttgctagcctcaaactcacactgtatt 244
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtttctacatagccttggctgttctgagacttgttgctagcctcaaactcacactgtatt 414

                                                                       
Query: 245 tgtcatcagatcactggacaccagaagacagta------------------tatcatcat 286
           |||||||||||||||||||||||||||||||||                  |||| ||||
Sbjct: 415 tgtcatcagatcactggacaccagaagacagtaaagaaatgctttttatgttatcgtcat 474

                                                                       
Query: 287 atgattttatacccagcaaagctaacatagaaagatacattgtagaattaagattttctc 346
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ataattttatacccagcaaagctaacatagaaagatacattgtagaattaagattttctc 534

                                                                       
Query: 347 agacatgcgaacacatattcttattattttctaatctggttctaatccctatcccacctc 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 535 agacatgcgaacacatattcttattattttctaatctggttctaatccctaccccacccc 594

                                                                       
Query: 407 aaacatttaatttatttcttcctacagaagcttttaaaaataccgttaaaccaaaaattt 466
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aaacacttaatttatttcttcctacagaagcttttaaaaataccgttaaaccaaaaattt 654

                                                                       
Query: 467 cttctgtttcccaaactaatactatttagaataatcttcttgttatttacttttgt---- 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 655 cttctgtttcccaaactaatactatttagaataatcttcttgttatttacttttgtcctt 714

                                                                       
Query: 523 tc--------tttccccattaatttccattcatctttaagaatgaattacaaagaaaaaa 574
           ||        ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 715 tccctcatcctttccccattaatttccattcatatttaagaatgaattacaaagaaaaaa 774

                                                                       
Query: 575 -tcttatgtgttcttttgcaaggtattactagttggtgttcattccttttattttgacca 633
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 atcttatgtgttcttttgcaaggtattactagttggtgttcattccttttattttgacca 834

                                                         
Query: 634 ttcatttcccctatttggatgctggttggggcttcctttgctgaag 679
           |||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 835 ttcatttcccctctttagatgctggttggggcttcctttgctgaag 880


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1080
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1070
Effective search space:   715830
Effective search space used:   715830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)