Query= MSMg01no328_e17.b1 MSMg01no328_e17.b1 CHROMAT_FILE:
MSMg01no328_e17.b1 PHD_FILE: MSMg01no328_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:24 2005
(341 letters)
>mm_chr19_58750911_58751651
Length = 741
Score = 540 bits (279), Expect = e-158
Identities = 328/347 (94%), Gaps = 7/347 (2%)
Strand = Plus / Plus
Query: 2 aggactcctactatgtccctgaaacataagttccgttgtgacaagtgagtgggaggaaac 61
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 202 aggactcctactatgtccctgaaacataagttccgttgtgacaagtgagtgcgaggaaac 261
Query: 62 tttggggtggagcatgcatttataacccaattttttcgtttcttttaagaagatttggtt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttggggtggagcatgcatttataacccaattttttcgtttcttttaagaagatttggtt 321
Query: 122 ttataggtattttgtctgtatttaagtatatcacactggtgtccacctggttcatgtgga 181
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttataggtatattgtctatatttaagtatatcacactggtgtccacctggttcatgtgga 381
Query: 182 agccataacaattcaggtacc-tggaactt-tagttacagatggtggtgagctgccatgt 239
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 382 agccataacaattcaggtaccctggaacttgtagttacagatggtggtgagctgccatgt 441
Query: 240 ggcttccggcctatttctccagtccttgtaacccagatctgagtgacctaatttacatac 299
|||||||| |||| ||||||||| |||||| |||| |||||||||||||||||| ||||
Sbjct: 442 ggcttccgacctagctctccagtctttgtaatccagttctgagtgacctaatttatatac 501
Query: 300 tg-----tatgtcttcgtctttctcttctcaagtcacttaataacta 341
| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 502 taatttatatgccttcgtctttctcttctcaagtcacttaataacta 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_e17.g1 MSMg01no328_e17.g1 CHROMAT_FILE:
MSMg01no328_e17.g1 PHD_FILE: MSMg01no328_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:24 2005
(337 letters)
>mm_chr19_58925799_58926535
Length = 737
Score = 598 bits (309), Expect = e-175
Identities = 330/337 (97%)
Strand = Plus / Minus
Query: 1 ctttgttcatacaaagccataaatccatgggttctggaaattaggacttgatacactgaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 537 ctttgttcatacaaagccataaatccatgcgttctggaaattaggacttgatacactgaa 478
Query: 61 gagttgggtccttactgtgtctgcctgagccagagaggtagagttcaccatggactgggg 120
||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 477 gagttaggcccttactgtgtctgcctgagccagagaggtagaggtctccatggactgggg 418
Query: 121 attgttagctagaaggtcttctgtctcccttgaggtctgtttgttggagaaagttccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 attgttagctagaaggtcttctgtctcccttgaggtctgtttgttggagaaagttccttc 358
Query: 181 ttagtgtcttacctttggtttgacttcatcttggtaggttcctcagagacagtgccctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttagtgtcttacctttggtttgacttcatcttggtaggttcctcagagacagtgccctct 298
Query: 241 tcaggctgtttcagccccctttcagaggcccatgctaaataaaaatctaaataaagattt 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcaggctgggtcagccccctttcagaggcccatgctaaataaaaatctaaataaagattt 238
Query: 301 atggactcccagatagggaaaactatcaaagtatcaa 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atggactcccagatagggaaaactatcaaagtatcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
