TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCTCCTGCGAACTAAATTATAATGAGATCTACAACACGAAAATG
AGATAAGCTAAACCCCGAAAAGAGTAAGGATGCAAATGCCTGCAGATAGT
CTTTTATAGCACCTGGGAGTTCAGATACAGAACCTTGGGTGGCAACCTTG
GAATACATTAAGTCTCAGTCTCTATTTTAAGAAATAGACAGGTGATTCAT
TTGCATTACAATTTCAGGGCTGCTGATCTAGCAACTCACTTTGCTAAGCT
GGGGGCAAACACTCCAGAGTGAATGCGTGATGGGACAAGGTTGAAGCAAT
AAGACTGTAAGCTGGATAGGCAAGATGGCAAGATGGAGTGAATTCACCTC
AGAAGTGTGAACTCAGAGAGATGCATTGATGACTTCTGATCTCAGCCCCT
GACCAGATGAGGCCAATGGAAGTACATCAGAAGCGTGGGACTAGTAGGTC
TTGCTTCAATTTGCCTCATTGATTCTAGTGAACCAGAGGAGGATGCTTCA
GGTCATGAAGGTGGCTATGCTCGTCTCTCCATTGACTTGACAGATTATTA
AGGAGTTTCGGTTTTTATATAAATTCAGAACTTTTTTTAGGTTTAGGGCC
ACATACACATGCACTTCCTATGGTGTATTTGTGGCAGCCACGATTGACTA
CTTCCGGTTACTTN

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACACTGGCCCTTAGTACACACCTT
TAATTCCTCTGCCTGGAAGCCTTTAGTACACACCTTTAATCCCAAACAAT
GTTTATTTGAGGGGCAGACAAAGTGATGAATCAGAAAAAGATTTGACAGG
AGTCAGAGATACACACAGGCCTCAGGAAAAAAGCTATTTATGAGCCAGTG
CAGGGAGAAGAAAGGGTGACTCAGTTCGGTAAGTCAGACTGGACTCAGTG
CAGTGAATGTGCAGTGCAGTGGAGTTGAGTTCATTTGCCAGTTTCTGCAG
TTCAGTGCAGGTCAGCAGAGGCAGGTGAAGCCGGAGAATAAGAGCCAGAG
GATTAGAATAAATGGAGAGAGTTACCTTGAGGCCAAGCAGAGCAATTCAA
TGAGAAGCTGAGAGAGGCCAGATTGAATCTGTCAGCATGAAGAGGACTGA
ACTCCTGAAGTCAGAACTGCTGAATTGAACCAGCTAGCCAGAGTTCAGAC
AGAATTAGAAAGACTGACCTTGCTAGTGTATGCAGTGGTGCCAGGTTTGG
AAGCTGATTATGGGGTGGATCCCTATATAAGGCAGTCTCTATATGGTCCA
TCCTTTTGCTGAAAGTTCCCAGTTTGTCCCTGTACTCCCTTCCATGGCTG
TTTTTGCCTCTAATTCCN

Query= MSMg01no329_j03.b1 MSMg01no329_j03.b1 CHROMAT_FILE:
MSMg01no329_j03.b1 PHD_FILE: MSMg01no329_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:04 2005
         (570 letters)



>mm_chr19_49687032_49688001
          Length = 970

 Score = 1056 bits (546), Expect = 0.0
 Identities = 561/566 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgctcctgcgaactaaattataatgagatctacaacacgaaaatgagataagct 64
           |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 770 gaattctgctcctgtgaactaaattataatgagatctacaacacgcaaatgagataagct 711

                                                                       
Query: 65  aaaccccgaaaagagtaaggatgcaaatgcctgcagatagtcttttatagcacctgggag 124
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 710 aaaccccgaaaagagtaaggatgcaaacgcctgcagatagtcttttatagcacctgggag 651

                                                                       
Query: 125 ttcagatacagaaccttgggtggcaaccttggaatacattaagtctcagtctctatttta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttcagatacagaaccttgggtggcaaccttggaatacattaagtctcagtctctatttta 591

                                                                       
Query: 185 agaaatagacaggtgattcatttgcattacaatttcagggctgctgatctagcaactcac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agaaatagacaggtgattcatttgcattacaatttcagggctgctgatctagcaactcac 531

                                                                       
Query: 245 tttgctaagctgggggcaaacactccagagtgaatgcgtgatgggacaaggttgaagcaa 304
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 530 tttgctaagctgggggcaaacactccagagtgaatgcgtgatggaacaaggttgaagcaa 471

                                                                       
Query: 305 taagactgtaagctggataggcaagatggcaagatggagtgaattcacctcagaagtgtg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 taagactgtaagctggataggcaagatggcaagatggagtgaattcacctcagaagtgtg 411

                                                                       
Query: 365 aactcagagagatgcattgatgacttctgatctcagcccctgaccagatgaggccaatgg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aactcagagagatgcattgatgacttctgatctcagcccctgaccagatgaggccaatgg 351

                                                                       
Query: 425 aagtacatcagaagcgtgggactagtaggtcttgcttcaatttgcctcattgattctagt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagtacatcagaagcgtgggactagtaggtcttgcttcaatttgcctcattgattctagt 291

                                                                       
Query: 485 gaaccagaggaggatgcttcaggtcatgaaggtggctatgctcgtctctccattgacttg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 290 gaaccagaggaggatgcttcaggtcatgaaggtggctatgctcgtctctccattgacttt 231

                                     
Query: 545 acagattattaaggagtttcggtttt 570
           ||||||||||||||||||||||||||
Sbjct: 230 acagattattaaggagtttcggtttt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)