Query= MSMg01no334_b01.b1 MSMg01no334_b01.b1 CHROMAT_FILE:
MSMg01no334_b01.b1 PHD_FILE: MSMg01no334_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:22 2005
(296 letters)
>mm_chr19_59869414_59870109
Length = 696
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%)
Strand = Plus / Plus
Query: 4 gaattcaactgaggtttccatattggaagccagatctgcctccttgttattccgatgtgt 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaactgaggctcccatattggaagccagatctgcctccttgttattccgatgtgt 263
Query: 64 ttcctgaactcatgttccactccaaaccagaggtgggatgattcagttcatcaatccagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcctgaactcatgttccactccaaaccagaggtgggatgattcagttcatcaatccagt 323
Query: 124 ggtggtgagaaacaggagaggttggaagttcaaggctcagcagatacttcctttagttga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtggtgagaaacaggagaggttggaagttcaaggctcagcagatacttcctttagttga 383
Query: 184 cctcgtaatgaaactatctgtccatctatctgtgtgtgtgtatgtgtgtgtgtttgtctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctcgtaatgaaactatctgtccatctatctgtgtgtgtgtatgtgtgtgtgtttgtctg 443
Query: 244 tgtgtatatatgtatgtgtgtgtgtttgtgtgtatgtatgtatgtgttgcatg 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtgtatatatgtatgtgtgtgtgtttgtgtgtatgtatgtatgtgttgcatg 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no334_b01.g1 MSMg01no334_b01.g1 CHROMAT_FILE:
MSMg01no334_b01.g1 PHD_FILE: MSMg01no334_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:23 2005
(239 letters)
>mm_chr19_60025406_60026045
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 tggccttgaactcacgccctgttaa-cacaagcggaactcatggtgtttacagttcttct 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 tggccttgaactcacgccctgttaagcacaagcggaactcatggtgtttacagttcttct 381
Query: 60 gccttggccttcacattactctggcctttacctctttcttattgtctaccttgaaatggg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccttggccttcacattactctggcctttacctctttcttattgtctaccttgaaatggg 321
Query: 120 agaataggaactgactcttttgtccaaatcggcttggctttccgtaccctttccttttct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaataggaactgactcttttgtccaaatcggcttggctttccgtaccctttccttttct 261
Query: 180 gaggatctaagtgttgctcgcctcgcacttgcctgaaaccagaaggtcacaagagactgc 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaggatctaagtgttgctcacctcgcacttgcctgaaaccagaaggtcacaagagactgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
