NCCCTAGTCTTGTGTCGCTATACGACTCACTATATTCAGAGGATCCGCGG
AATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTGTTCGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGCCCCC
TATCTGATTTAGGATAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGT
CTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGT
CCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTC
AGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTC
CTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACT
TAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCAATTCGCATTCTT
CTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTC
TTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCAT
AGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACT
TGTCTGTTTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTA
ATAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCT
TGAAAAGACTTTTATGCTATCCTAGGTTTTTTGTTAT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCATCTGAAATTTTTCCATATGTTTCTTTC
TTTGATTATGGAGAGTAGATTGCACTAGGAAATATCTTTCATCACAAAAA
AAAATGTAACCAAAATGTAAAGGATCAGTGTTCCTTGGGAAGAAACATAT
CTGACCCTTTGAATCAATGTGTTTGGTGGGTTATGATATATTTTTGCTCC
ACCAGTTCCTTGCAGCAGCAGGGAAAAAGGAACAGACAGCATTTCTCATG
TTCAGAACCTCAGAATGCTCTTAAATGCAGAAAACCAAGAGTGTTACTTT
TGAAAAATGAAAATATTTGAGGGATATGATGTCGGGGTTACCTATTCCCA
GATTTTCCATTAAAATGGGTATATATTGTTATTGATTTGGCTTAAAGATA
AATGCAGCATTCAACTTACTGTATGCCCAACAATTAGTAGTTGAGTATTT
ACTCTGATGGAGGAGACGATGCCATGGAAGATGGGGAAGACAGTACCTTA
AATATACTAGATGTAAAAGCATAAGTACTCAGAAGGTTCATCCTGTTTAA
TCTTCAAAACTGGTGTAAGGGATAATAGTGACACACTAACCAGTGTCCCC
ACTGTCCATAGAAGAAGGCCCGTTATCTGCTTTAGGTTACAAACCAGTAT
GCACCATAGCCCCAGCCCCACACTCCTATATCTGCAT

Query= MSMg01no335_a16.g1 MSMg01no335_a16.g1 CHROMAT_FILE:
MSMg01no335_a16.g1 PHD_FILE: MSMg01no335_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:40 2005
         (570 letters)



>mm_chr19_31783688_31784659
          Length = 972

 Score = 1029 bits (532), Expect = 0.0
 Identities = 562/572 (98%), Gaps = 2/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catctgaaatttttccatatgtttctttctttgattatggagagtagattgcactaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctgaaatttttccatatgtttctttctttgattatggagagtagattgcactaggaa 260

                                                                       
Query: 61  atatctttcatcacaaaaaaaaa-tgtaaccaaaatgtaaaggatcagtgttccttggga 119
           ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 261 atatctttcatcacaaaaaaaaaatgtaaccaaaatgtaaaggatcagtggtccttggga 320

                                                                       
Query: 120 agaaacatatctgaccctttgaatcaatgtgtttggtgggttatgatatatttttgctcc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacatatctgaccctttgaatcaatgtgtttggtgggttatgatatatttttgctcc 380

                                                                       
Query: 180 accagttccttgcagcagcagggaaaaaggaacagacagcatttctcatgttcagaacct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accagttccttgcagcagcagggaaaaaggaacagacagcatttctcatgttcagaacct 440

                                                                       
Query: 240 cagaatgctcttaaatgcagaaaaccaagagtgttactttt-gaaaaatgaaaatatttg 298
           |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 441 cagaatgctcttaaatgcagaaaaccaagagtgttaatttttgaaaaatgaaaatatttg 500

                                                                       
Query: 299 agggatatgatgtcggggttacctattcccagattttccattaaaatgggtatatattgt 358
           |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggatatgatgtcagggtaacctattcccagattttccattaaaatgggtatatattgt 560

                                                                       
Query: 359 tattgatttggcttaaagataaatgcagcattcaacttactgtatgcccaacaattagta 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattgatttggcttaaagataaatgcagcattcaacttactgtatgcccaacaattagta 620

                                                                       
Query: 419 gttgagtatttactctgatggaggagacgatgccatggaagatggggaagacagtacctt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 gttgagtatttactctgatggaggagacgatgccatggaagatggggaagacagtgcctt 680

                                                                       
Query: 479 aaatatactagatgtaaaagcataagtactcagaaggttcatcctgtttaatcttcaaaa 538
           ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatatactagatgtaaaagcttaactactcagaaggttcatcctgtttaatcttcaaaa 740

                                           
Query: 539 ctggtgtaagggataatagtgacacactaacc 570
           |||||||| |||||||||||||||||||||||
Sbjct: 741 ctggtgtaggggataatagtgacacactaacc 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 972
Length adjustment: 10
Effective length of query: 560
Effective length of database: 962
Effective search space:   538720
Effective search space used:   538720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)