CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTGAACATACTTCATACAAATATGTGGTTTTAAACTAGACATGT
GGCCAGGAAGATGGAAGGTTCAATAGATATAGACACTTGCTGCTAAGCCT
GAAAGCCCAGTTTGACCCTCCCTAAGATCTTTATGGTAGAAGGAGAGAAC
CAACACTGGGAAGTTGTCCACTGACCTTCATAAGCCAAGCTCTTCACACA
CAATACATACATACATACATACATACATACATGTAATTAAGACAAACACA
AATGCTTAGACACAAAGAGGTACAGCAAAACAAAACTGTTACCAAGAAAA
AAAATTTTTTTTGTAAATTAGTCTTTACTTTAAATTCTGAAAAACATTAG
TTCTGATTTTAACACTAGGAAAACATGTTCTACAAAAACTTCAATTATTT
TCCAGTAATTTTCTGTGAAACAGAAGTAGAAGGAATTCTAGTTCCCATGA
GTTTGACAGCGTGAATCACTTCACATAATTGTAATATTTTCAAAAGAATA
GATTATTTGATCAGCGTAATAATAGATATCCCAGAAATAGACACTTATAA
ATATAGTCATCTGATCTTTGACAAAGATGCACAGACAGTGCAGTGGAGAA
TACAGACATTTCACCATGTTATATTGGGACAACGTGGGAGCTGGCTACCA
AGCAAATGAAAAGACTACGGTAAAGTATGGGAGAGAGGGGAAAGATCCTG
TGACCAA

AATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTATCATGAA
TGGGTGTTGGATCTTGTCTAATGCTTTTTCTGCATTCAGTGTTTCTATCA
CTGTTTTTTTTTTTTATCTCTACTCTTTATGACCCCTTCCAAATTTCTTG
AACTTTATGGTATTCCAAATTAAGCATATTTATTTGAAGCTTTCAAGTTA
ACACCTACAAATGAGAAAAAAACAAAACAAAACAAAACATGAAACTTTTA
TCTTTCTGATCTAGGTTACCTCACAATGATTATTTCTAGCTCTCTCTATT
TATTTTCAAATTTCATTTCTTAATAGCTATTAATATTCCACTTCATAAAT
TTACCACACTTTTATTAGCTATATATTAGTTGATGGGCATCTACGCCATT
TCCCTTTTCTGACTCTTGTGAGTATAGCAACAATGAACATGAATGAGTAT
GTATCTCTGTAGTAGGATATAAATCCTTTGGGTATCCCCAAGGGTGGATC
ATGCGGTAGACCTATTTTTAGGTTCTGAAGAACCTTTGGATTGATTTCCA
TAGTGACTGCATCAATTATAACTCCCACCAACACCATTTTAAATTATTCT
CTTTTGGGGCAATTTTCCACTAAATTTTGGCACAAGGGTCTTTTGTTTGT
TTACTCTGTCTCCTTTCTTTTATCTTCTTCTCTTCTGTCTATCTTACAAA
TCAAACCTTCTCG

Query= MSMg01no337_e06.b1 MSMg01no337_e06.b1 CHROMAT_FILE:
MSMg01no337_e06.b1 PHD_FILE: MSMg01no337_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:36 2005
         (578 letters)



>mm_chr19_22340412_22341388
          Length = 977

 Score = 1056 bits (546), Expect = 0.0
 Identities = 566/574 (98%), Gaps = 5/574 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattgaacatacttcatacaaatatgtggttttaaactagacatgtggccaggaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 gaattcattgaacatacttcatacaaatatgtggttttaaactagacatgtggccaggaa 853

                                                                       
Query: 65  gatggaaggttcaatagatatagacacttgctgctaagcctgaaagcccagtttgaccct 124
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 852 gatggaaggttcaatagatataaacacttgctgctaagcctgaaagcccagtttgaccct 793

                                                                       
Query: 125 ccctaagatctttatggtagaaggagagaaccaacactgggaagttgtccactgaccttc 184
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 792 ccctaagatctttatggtagaaggagagaaccaacgctgggaagttgtccactgaccttc 733

                                                                       
Query: 185 ataagccaagctcttcacacacaatacatacatacatacatacatacatacatgtaatta 244
           |||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||
Sbjct: 732 ataagccaagctcttcacacacaatacat--at--atacatacatacatacatgtaatta 677

                                                                       
Query: 245 agacaaacacaaatgcttagacacaaagaggtacagcaaaacaaaactgttaccaagaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agacaaacacaaatgcttagacacaaagaggtacagcaaaacaaaactgttaccaagaaa 617

                                                                       
Query: 305 aaaaattttttttgtaaattagtctttactttaaattctgaaaaacattagttctgattt 364
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaaaa-tttttttgtaaattagtctttactttaaattctgaaaaacattagttctgattt 558

                                                                       
Query: 365 taacactaggaaaacatgttctacaaaaacttcaattattttccagtaattttctgtgaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 taacactaggaaaacatgttctacaaaaacttcaattattttccagtaattttctgtgaa 498

                                                                       
Query: 425 acagaagtagaaggaattctagttcccatgagtttgacagcgtgaatcacttcacataat 484
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 actgaagtagaaggaattctagttcccatgagtttgacagcgtgaatcacttcacataat 438

                                                                       
Query: 485 tgtaatattttcaaaagaatagattatttgatcagcgtaataatagatatcccagaaata 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgtaatattttcaaaagaatagattatttgatcagcgtaataatagatatcccagaaata 378

                                             
Query: 545 gacacttataaatatagtcatctgatctttgaca 578
           ||||||||||||||||||||||||||||||||||
Sbjct: 377 gacacttataaatatagtcatctgatctttgaca 344


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 977
Length adjustment: 10
Effective length of query: 568
Effective length of database: 967
Effective search space:   549256
Effective search space used:   549256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)