Query= MSMg01no337_n13.b1 MSMg01no337_n13.b1 CHROMAT_FILE:
MSMg01no337_n13.b1 PHD_FILE: MSMg01no337_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:20 2005
(628 letters)
>mm_chr19_21660539_21661566
Length = 1028
Score = 1199 bits (620), Expect = 0.0
Identities = 623/624 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccattctcgctgttttcagactttctgagcatgaaaaaatttagaacactaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccattctcgctgttttcagactttctgagcatgaaaaaatttagaacactaaa 264
Query: 65 ttttttcctccaggggaacaattagacccattggttcagagtacatgaccagaaagacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttttcctccaggggaacaattagacccattggttcagagtacatgaccagaaagacat 324
Query: 125 attaaatgtaaattacagtttgaaaatcatttcatgggggctggagaaatggctcatcgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attaaatgtaaattacagtttgaaaatcatttcatgggggctggagaaatggctcatcgt 384
Query: 185 ttaagagcactagctgctcttccggggacctgggttcagttcccagcatccacatggtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttaagagcactagctgctcttccggggacctgggttcagttcccagcatccacatggtgg 444
Query: 245 ctcacaactgaggtctgactcaagtcccaagggatccaatgttctcttctggtctcttgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcacaactgaggtctgactcaagtcccaagggatccaatgttctcttctggtctcttgg 504
Query: 305 gcaccagacatgcatgtggtacacaaacatacatgcagaaatacttgtatacatatcaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaccagacatgcatgtggtacacaaacatacatgcagaaatacttgtatacatatcaaa 564
Query: 365 aattaaaatgaaaataaaccattctgatttatatttcctgacttagtaaaaaacaaaaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aattaaaatgaaaataaaccattctgatttatatttcctgacttagtaaaaaacaaaaca 624
Query: 425 gtgtaacatcctgggctgagggacatcagggctgtccttcagagtgtctaaccttgagtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgtaacatcctgggctgagggacatcagggctgtccttcagagtgtctaaccttgagtg 684
Query: 485 gccctggccatttccacagggctgattcatttcctgtaccattgagatcactgtacccag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccctggccatttccacagggctgattcatttcctgtaccattgagatcactgtacccag 744
Query: 545 gtcaccatgatctttcttgatagttgtaaaataaactttaaaaccacagattaacaaaaa 604
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 745 gtcaccatgatctttcttgatagttgtaaaataaacttaaaaaccacagattaacaaaaa 804
Query: 605 catactctacaaatgggcttagga 628
||||||||||||||||||||||||
Sbjct: 805 catactctacaaatgggcttagga 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_n13.g1 MSMg01no337_n13.g1 CHROMAT_FILE:
MSMg01no337_n13.g1 PHD_FILE: MSMg01no337_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:20 2005
(514 letters)
>mm_chr19_21790729_21791643
Length = 915
Score = 874 bits (452), Expect = 0.0
Identities = 464/468 (99%), Gaps = 1/468 (0%)
Strand = Plus / Minus
Query: 44 tgtatggatattttgtctgcatggatgtttatgtaccacatgtgtgcctgctgccttaca 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tgtatggatattttgtctgcatggatgtttatgtaccacatgtgtgcctgctgccttaca 856
Query: 104 gaggccagaagagggcatcagattccccagtagttggggctacagaccttggttagctgc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaggccagaagagggcatcagattccccagtagttggggctacagaccttggttagctgc 796
Query: 164 cttgtgggttctgggacctgaaattgtgtcctctggaagagcagccagtgagtgctctta 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 cttgtgggttctgggacctgaaattgtgtcctctggaagagcagccagtgagtgctctta 736
Query: 224 tcttctgcaccatctctgctgcccaggagaagagtgttgagaatcccccc-cccccatag 282
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 735 tcttctgcaccatctctgctgcccaggagaagagtgttgagaatccccccacccccatag 676
Query: 283 tcttagcaattgtgactatttgcacttctcacatgcattcacattcaagatctgctggca 342
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcctagcaattgtgactatttgcacttctcacatgcattcacattcaagatctgctggca 616
Query: 343 gcaaaatttggatgtaggcgtgaggatctaggcgtttaaaaataaattcattgttttaat 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gcaaaatttggatgtaggcgtgaggatctaggcgtttaaaaataaattcattgttttaat 556
Query: 403 gtatgtagtatttagagtcatttaaattaacattctagtgagagtaagatacagaagtat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtatgtagtatttagagtcatttaaattaacattctagtgagagtaagatacagaagtat 496
Query: 463 ttccaacaaaatacaataacttcatgaatcacaatttccagctggaaa 510
||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 495 ttccaacaaaatataataactgcatgaatcacaatttccagctggaaa 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 915
Length adjustment: 10
Effective length of query: 504
Effective length of database: 905
Effective search space: 456120
Effective search space used: 456120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
