NNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAGAGGATTGGCGAAATGAAAAAATACCAAAGAAAGATCCAG
AGATGAATCAGAGGATGCTCAGGACAGATAGGTAGTCCAGATATGTGGGA
ATGCTTTGATTCATGTGTACTGAAAGGAAAAGGAACTATTATGGAGAATT
CTTATAATTTTATATTGCACCATCAACCACTTAAAACATACGTCGAACTT
TCTCATAACAGAAGCGAGTGACGCTTGGCTACGTTCCTAGTTCCTCATTG
TGGTCAATCCGGTTATCTGCCTCATAGAAGTGCCTCTCAGTAGCCACTTC
CCTGTGTGGCAGTTACAATCTGCTTGACAGACCTTGTTCACTTCCACATG
CTGCACAGCCTGCACAAAGTCACTATAGAAACAAGTCTCCATCACAGAAG
GAGTTCTTGAAGTTTCCTTTCTATCCACTGACAAAAATTTCCTGCAGAAA
AACTTGTTTGGATAATGTGTTCTGAATCCATTAAAGGCATTGGCTCACAG
GTCCCCATTTTTCTCTCTCTCTACTCCCTAGCCCTCATGTGTGTCTTACA
GGTATCCATATGTTCTTATTGGCCTGTAAGTAATAATTAAGTAATAAAAT
ACTTCCATCTTGCCTCTCTTAAAACTACAAGTGTGTTGCCCATCTTAAAG
ATCTTAAATGAAGACAAAAGTACAAGAAGAA

NNNCCCGATGCTANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGGCAAATGGATGGTAC
TAGAAAATATCATCCTGAGTGAGGAAGCACAGACTCAAAAGGACATGAAC
ATTGTACACTTATAAGTGGATATTAGTGACAAAATAGAGGATAAACACAC
TATAATCCACAGAACCCCCAAAAGCCACATAACAAGCGAAGGCCTCAAGG
CAGGCTAGGCTGAATCATACTCAGCAAGCGGACAACAAAATCAAACATCA
CAGGTTGATGGAAGCAGGGAACTGGATGGGAGAGATCGGGAGGGGAGTGG
GTATGATNNNNTGNNNNNNNNNTNNNNNNNNNNNNNNNTNNNNTNNNTNN
NTNTTTTTNNTTTTNTTTTTTTTTNNNNTTTTNTTTTTTTTTTTTTTTTT
TTTTTTNNTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTT
TNTTTTTTTTTNNNNTTTTTNTTTTTTTTTTNNTTTNTTTTTTTTTTTTT
TTTTTTTTNTTTTTTTTTTNTTTNNNNNTTTTTTTTTTTTTNTNNTTTTT
TTTTTNTTNNTNTTTNNNNNTTTTTTNNTTTTTTTNTNTTTNTNNTNTTT
TTTTTTTTTTTTTTTNTTNTTTNTTNTTTTTTTTTNTTNTTTTTTTNTTT
TNNNTTTTTTTNTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTGGGTGTG
GGTGTGTG

Query= MSMg01no339_e03.b1 MSMg01no339_e03.b1 CHROMAT_FILE:
MSMg01no339_e03.b1 PHD_FILE: MSMg01no339_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:03 2005
         (632 letters)



>mm_chr19_36080523_36081554
          Length = 1032

 Score = 1199 bits (620), Expect = 0.0
 Identities = 629/632 (99%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgaaaaaataccaaagaaagatccagagatgaatcagaggatgctcaggacagatagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgaaaaaataccaaagaaagatccagagatgaatcagaggatgctcaggacagatagg 260

                                                                       
Query: 61  tagtccagatatgtgggaatgctttgattcatgtgtactgaaaggaaaaggaactattat 120
           | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtccagatgtgtgggaatgctttgattcatgtgtactgaaaggaaaaggaactattat 320

                                                                       
Query: 121 ggagaattcttataattttatattgcaccatcaaccacttaaaacatacgtcgaactttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagaattcttataattttatattgcaccatcaaccacttaaaacatacgtcgaactttc 380

                                                                       
Query: 181 tcataacagaagcgagtgacgcttggctacgttcctagttcctcattgtggtcaatccgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcataacagaagcgagtgacgcttggctacgttcctagttcctcattgtggtcaatccgg 440

                                                                       
Query: 241 ttatctgcctcatagaagtgcctctcagtagccacttccctgtgtggcagttacaatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatctgcctcatagaagtgcctctcagtagccacttccctgtgtggcagttacaatctg 500

                                                                       
Query: 301 cttgacagaccttgttcacttccacatgctgcacagcctgcacaaagtcactatagaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgacagaccttgttcacttccacatgctgcacagcctgcacaaagtcactatagaaac 560

                                                                       
Query: 361 aagtctccatcacagaaggagttcttgaagtttcctttctatccactgacaaaaatttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtctccatcacagaaggagttcttgaagtttcctttctatccactgacaaaaatttcc 620

                                                                       
Query: 421 tgcagaaaaacttgtttggataatgtgttctgaatccattaaaggcattggctcacaggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcagaaaaacttgtttggataatgtgttctgaatccattaaaggcattggctcacaggt 680

                                                                       
Query: 481 ccccatttttctctctctctactccctagccctcatgtgtgtcttacaggtatccatatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccccatttttctctctctctactccctagccctcatgtgtgtcttacaggtatccatatg 740

                                                                       
Query: 541 ttcttattggcctgtaagtaataattaagtaataaaatacttccatcttgcctctcttaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcttattggcctgtaagtaataattaagtaataaaatacttccatcttgcctctcttaa 800

                                           
Query: 601 -aactacaagtgtgttgcccatcttaaagatc 631
            |||||||||||||||||||||||||||||||
Sbjct: 801 taactacaagtgtgttgcccatcttaaagatc 832


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)