NNNAATTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGTTGGCAATAATTTTATTGAGTATTTTTGCATCAATGTT
CATAAGGGAGATTAGTCTGAAGTTCTCTCTCTTTGTGTTGTTTAGGTATA
TGCATAATTGTAGCTTCATAGAACGAATTGGGTAGTGTTCCTTCTGTTTC
TTTTTTGTGGAATAGTTTGAAGAGTATTGGTATTAGGTCTTCTTTAAAGG
TCTGATAAAATTCTCCACTAAACCCATCTGGTCCTGGGCCTTTTTTGATT
GGGAGACTACTAATGACTGCTTCTATTTCTTTAGGGATTTTCAGACTGTT
TATATGATTTATCTGATCCTGTTTTAACTTTGGCACCTGTGTCTAGAAAA
TTGTCCATTTCATCCAGATTTTCCAATTTAGTTGAGTATAAACTTTTGTA
ATAGGATCTAATGATTTTTTGGATTTCCACAGTTTCTGTTGTTATCTCTC
CCTTTTCATTTCTGATTTAATTAATTTGGATACTGTCTCTGTGCCCTCTG
GTTAGTCTGGCTAAGGGTTCATCTATCTTATTGATTTTCTGAAAGAACCA
GTTCCTGGNTTTGTTGATTCTTTGTATAGNTCTTTTTGGTTCTATTTGGN
TGATTTCAGCCCTGAGTTTGATTATTTTCTGCCATCTACTCCTCTTGGGG
ATATTTGCTTCTTTTTGGTCTAAAGCTTTCAGGG

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGGGCATGTGCATCTCAACTTTAG
AGTTTCCTCAAGGGTATATTTTCTGCTCCTATCAATAACCTTTATTTGAA
GTTTGACAGTCAATGGAATAGGATCCTTTAATTTCAGTTATCAGTTTCCT
ATATGGAATACGCTCTTAACTTTTTGTTGGGAAGTCTTCTTTTGAGCTTT
TAATTCAACCAAATATTCACTTCTCTTTCCATCTATTCCCTTTTTAAAAT
TGAATTTCATATATAGGCGCATGGATTTGTTGTACTATTTTACTATATAG
GGAATACATATACGTGGACATTTCTTTTTCATGTATTATTCTTTGCCGTT
GGGTTATTTTTTTTAGCATTTTATTATTAGGTTGTTTTTACAAGAAATAA
AAACAATCCTGCTAATATTCTTCCTTTCTTTCTTCTCTTACTTTAACTTA
AGCAACTCCCTTAATATTCTCCATCCTAAAATAGAAGACTATACACTATA
TGCTGGTTTATTATTATTATTATTATTATTATTATTATTATTATTATTTC
AAGTTCCACCTCAAATCAGCAATGCAGAAGACATTTTAGTTCATACAAAA
ATGTAGTCTCATCTGGATGCTGGTTTGTGCCTACAACACACATGCTTTTT
GTAGGGAGGTTGTTGTTGTTGTGGGTTGTNNGTN

Query= MSMg01no340_d22.g1 MSMg01no340_d22.g1 CHROMAT_FILE:
MSMg01no340_d22.g1 PHD_FILE: MSMg01no340_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:14 2005
         (524 letters)



>mm_chr19_43256657_43257580
          Length = 924

 Score =  899 bits (465), Expect = 0.0
 Identities = 491/501 (98%), Gaps = 3/501 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggcatgtgcatctcaactttagagtttcctcaagggtatattttctgctcctatcaat 60
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggcatgtgcatctcagttttagagtttcctcaagggtatattttctgctcctatcaat 260

                                                                       
Query: 61  aacctttatttgaagtttgacagtcaatggaataggatcctttaatttcagttatcagtt 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacctttatttgaggtttgacagtcaatggaataggatcctttaatttcagttatcagtt 320

                                                                       
Query: 121 tcctatatggaatacgctcttaactttttgttgggaagtcttcttttgagcttttaattc 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tcctatatggaatacgctcttaactttttgttgggaagtcttcttttgagctcttaattc 380

                                                                       
Query: 181 aaccaaatattcacttctctttccatctattccctttttaaaattgaatttcatatatag 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccaaatattcacttctctttccatctattccctttttaaaattgaatttcatatatag 440

                                                                       
Query: 241 gcgcatggatttgttgtactattttactatatagggaatacatatacgtggacatttctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgcatggatttgttgtactattttactatatagggaatacatatacgtggacatttctt 500

                                                                       
Query: 301 tttcatgtattattctttgccgttgggttattttttttagcattttattattaggttgtt 360
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 tttcatgtattattctttgccgttgggttattttttttaacattttattattaggttgtt 560

                                                                       
Query: 361 tttacaagaaataaaaacaatcctgctaatattcttcctttctttcttctcttactttaa 420
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttacaagaaataaaaacaaccctgctaatattcttcctttctttcttctcttactttaa 620

                                                                       
Query: 421 cttaagcaactcccttaatattctccatcctaaaatagaagactatacactatatgctgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 621 cttaagcaactcccttaatattctccatcctaaaatagaagactatacactatatgctg- 679

                                
Query: 481 tttattattattattattatt 501
             |||||||||||||||||||
Sbjct: 680 --tattattattattattatt 698


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)