Query= MSMg01no345_g23.b1 MSMg01no345_g23.b1 CHROMAT_FILE:
MSMg01no345_g23.b1 PHD_FILE: MSMg01no345_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:53 2005
(474 letters)
>mm_chr19_6233071_6233944
Length = 874
Score = 876 bits (453), Expect = 0.0
Identities = 465/469 (99%)
Strand = Plus / Minus
Query: 6 gaattctctcaggctacctctgggacccgtgtgggaagaacaagtgcatacccttcagct 65
|||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||
Sbjct: 674 gaattctctcaggctacctctgggacccgtgtgggaggaataagtgcatacacttcagct 615
Query: 66 tggtcgcaggcgcgtgctcccacttccactgggtctcactgctgcccgacaccgtctcag 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 614 tggtcgcaggcgcgtgctcccacttccactgggtctcactgctgcccgacaccgtctcgg 555
Query: 126 gatttcctctccctgttgtccctatacttgagtgagctgggcctagggtacctgtcctct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gatttcctctccctgttgtccctatacttgagtgagctgggcctagggtacctgtcctct 495
Query: 186 gggccacttgtcttccatggtctgactcaggcatgggctattctaagaaaccctctcgcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gggccacttgtcttccatggtctgactcaggcatgggctattctaagaaaccctctcgcc 435
Query: 246 cagtctgatcagaaacgcttgggctctgaatgcctgggctgtccactgctttcaacctta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cagtctgatcagaaacgcttgggctctgaatgcctgggctgtccactgctttcaacctta 375
Query: 306 ccatcactgctgaaccacatccacacacggatgtgtcaagccacccttgggtctccagcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccatcactgctgaaccacatccacacacggatgtgtcaagccacccttgggtctccagcc 315
Query: 366 cttgacttgcatgagcttggtgtttagatgaagattgtccagaggagcaagttgcctgct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cttgacttgcatgagcttggtgtttagatgaagattgtccagaggagcaagttgcctgct 255
Query: 426 gggaagtgggtcagtccagaattggatgagggctggtggtaaaactcag 474
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gggaagtgggtcagtccagaattggatgagggctggtggtaaaactcag 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_g23.g1 MSMg01no345_g23.g1 CHROMAT_FILE:
MSMg01no345_g23.g1 PHD_FILE: MSMg01no345_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:53 2005
(443 letters)
>mm_chr19_6076409_6077251
Length = 843
Score = 849 bits (439), Expect = 0.0
Identities = 442/443 (99%)
Strand = Plus / Plus
Query: 1 cataagtggcacactttaagtagcacacttcacaggttagacccaatttgggatttgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataagtggcacactttaagtagcacacttcacaggttagacccaatttgggatttgtca 260
Query: 61 gcgttcatggtcttctggcttagtttaaagtcaacctaggccctgcctagcgcctgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgttcatggtcttctggcttagtttaaagtcaacctaggccctgcctagcgcctgtcaa 320
Query: 121 gagcatggtcacacccactaccacgagccagcaccgagacctcagacccagtgtgacctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcatggtcacacccactaccacgagccagcaccgagacctcagacccagtgtgacctc 380
Query: 181 aagtcaggcccaggctcccttagcctccagatctgcctctattgcctagtaagggctgtc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtcaggcccaggctcccttggcctccagatctgcctctattgcctagtaagggctgtc 440
Query: 241 ctcttataaaccccgctgccgtcaccacagcaaccaaatcgggagtaagatctagggtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcttataaaccccgctgccgtcaccacagcaaccaaatcgggagtaagatctagggtcc 500
Query: 301 aagatatttggggtctggacccgccccatttcacacacacaccttgtcaagataaacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagatatttggggtctggacccgccccatttcacacacacaccttgtcaagataaacttc 560
Query: 361 cgggtcgaagtgcgccccattgagatcggttgggtccagagggtcaggccctgcgggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgggtcgaagtgcgccccattgagatcggttgggtccagagggtcaggccctgcgggatg 620
Query: 421 ccccgccacctccccctccgaga 443
|||||||||||||||||||||||
Sbjct: 621 ccccgccacctccccctccgaga 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
