Query= MSMg01no345_i13.b1 MSMg01no345_i13.b1 CHROMAT_FILE:
MSMg01no345_i13.b1 PHD_FILE: MSMg01no345_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:00 2005
(581 letters)
>mm_chr19_38056699_38057679
Length = 981
Score = 1038 bits (537), Expect = 0.0
Identities = 570/581 (98%)
Strand = Plus / Plus
Query: 1 gggtctgaccagaggtctgtctggcccagctcacgttagaagcatgttagtgcctggatc 60
||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 201 gggtctgaccagaggtctgcctggctcagctcacgttagaagcatgttagtgactggatc 260
Query: 61 ttcttccttcagaaggcagttcatcctctgagaactgttgaggtgcccatcaagaatcca 120
||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 261 ttcttccttcagaaggcagctcatcctctgaggcctgctgaggtgcccatcaagaatccg 320
Query: 121 cacagtgagaactacttgaaaaagtatagcttctcttatccaacgtcactttctgttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagtgagaactacttgaaaaagtatagcttctcttatccaacgtcactttctgttctc 380
Query: 181 atttcagacttacaagtggcttttcaaacagaactctggggccattggtaagtagagctg 240
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 atttcagacttacaagtggcttttcggacagaactctggggccattggtaagtagagctg 440
Query: 241 gttatgggactttttgtcagcaccaaacacatcctttatagagatggctttgcttccatc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttatgggactttttgccagcaccaaacacatcctttatagagatggctttgcttccatc 500
Query: 301 cacagacagaagctggcaaagaccttcattgacacaccaaggccccatgctttggaatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagacagaagctggcaaagaccttcattgacacaccaaggccccatgctttggaatgc 560
Query: 361 tattagtattatacatttaaggtagacaagacccataaagccttcagcaaaaatcatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattagtattatacatttaaggtagacaagacccataaagccttcagcaaaaatcatggt 620
Query: 421 gtctaccctctacctagaaccctaaagatgccactgccatgcgtgccctgaggcctggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctaccctctacctagaaccctaaagatgccactgccatgcgtgccctgaggcctggct 680
Query: 481 gtgaatcagattccctattaagagagttctcatctttatatcattgaaagaagtatactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgaatcagattccctattaagagagttctcatctttatatcattgaaagaagtatactg 740
Query: 541 ctgtcactcaccttaaattcccccatcagacaatctgccct 581
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgtcactcaccttaaattcccccatcagacaatctgccct 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_i13.g1 MSMg01no345_i13.g1 CHROMAT_FILE:
MSMg01no345_i13.g1 PHD_FILE: MSMg01no345_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:00 2005
(399 letters)
>mm_chr19_38238607_38239404
Length = 798
Score = 710 bits (367), Expect = 0.0
Identities = 391/399 (97%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 1 tgaggaatccttccagggcaatataaaggggctcactgcaggttttttttttttaatgaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 537 tgaggaatccttccagggcaatataaaggggctcactgcagg-ttttttttttaaatgaa 479
Query: 61 taattagtttaagactgcatttgagtccaggaacttaatgaatctgccagagggtgccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 taattagtttaagactgcatttgagtccaggaacttaatgaatctgccagagggtgccac 419
Query: 121 ctgtgctgaggctgaaggagaagggcttgtctccaatctgatgtcaagaaactcttctat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgtgctgaggctgaaggagaagggcttgtctccaatctgatgtcaagaaactcttctat 359
Query: 181 agccacaccttccttctgccaaatatgcaggaaagaaatggctgaaaaatgccaacagct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggccacaccttccttctgccaaatatgcaggaaagaaatggctgaaaaatgccaacagct 299
Query: 241 tagataccttgccaatatgaagcccgggatgtgactccatccatctcaaaagtctgcaag 300
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tagatatcaggccaatatgaagcccgggatgtgactccatccatctcaaaagtctgcaag 239
Query: 301 caagaacgggcctcatctatcctggctgctgactacatcctaaaacaggtctgacttcat 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 caagaatgggcctcatctatcctggctgctgactacatcctaaaacaggtctgacttcat 179
Query: 361 ctttctgagtctctttactcatccatggaagaggaataa 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctttctgagtctctttactcatccatggaagaggaataa 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 798
Length adjustment: 9
Effective length of query: 390
Effective length of database: 789
Effective search space: 307710
Effective search space used: 307710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
