Query= MSMg01no347_e09.b1 MSMg01no347_e09.b1 CHROMAT_FILE:
MSMg01no347_e09.b1 PHD_FILE: MSMg01no347_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:12 2005
(531 letters)
>mm_chr19_24512018_24512948
Length = 931
Score = 955 bits (494), Expect = 0.0
Identities = 521/530 (98%), Gaps = 2/530 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttagtctccatcctgacacatctttctcctgagtgcaccatcaccggagata 63
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 202 ggaattctttagtcttcatcctgacacatctttttcctgagtgcaccatcaccggagata 261
Query: 64 gccatctccatgtttatatttctaggtttctctgagtagaaaagaagagttaaaaagatc 123
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 262 gcaatctccatgtttatatttctaggtttctctgagttgaaaagaagagttaaaaagatc 321
Query: 124 cacaggaaaaggacacttaggaaagcgacatttcacatgactcatgaccagagtccatgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cacaggaaaaggacacttaggaaagcgacatttcacatgactcatgaccagagtccatgg 381
Query: 184 tcagaacagacgtctggagaaaagttctcactagctgtccatcaaaaaa-gagcaagtag 242
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 382 tcagaacagacgtctggagaaaagttctcactagctgtccatcaaaaaaagagcaagtag 441
Query: 243 aaacaaaaaa-tgggatatagtaaatctataatacacaggcatcaatagccccaaagaga 301
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaacaaaaaaatgggatatagtaaatctataatacacaggcatcaatagccccaaagaga 501
Query: 302 aaaaggcaagaacttttaaaagctgtaatgtataaagttaacttagaagtgggtacaggg 361
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agaaggcaagaacttttaaaagctgtaatgtataaagttaacttagaagtgggtacaggg 561
Query: 362 aactttcgggatagcatttgaaatctatataaagaaaatatctaataaaaaagtctttgt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aactttcgggatagcatttgaaatctatataaagaaaatatctaataaaaaagtctttgt 621
Query: 422 gccattttttcacactgcattaaaaaaaaagtggggacagtgctgctaagggtcatattt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gccattttttcacactgcattaaaaaaaaagtggggacagtgctgctaagggtcatattt 681
Query: 482 tatccaacagtaatgctaacattagcttgattagcttagagccaaaaatg 531
|||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 682 tatccaacagtaatgctaacattagcttgattagtttagaggcaaaaatg 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_e09.g1 MSMg01no347_e09.g1 CHROMAT_FILE:
MSMg01no347_e09.g1 PHD_FILE: MSMg01no347_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:12 2005
(442 letters)
>mm_chr19_24632129_24632969
Length = 841
Score = 797 bits (412), Expect = 0.0
Identities = 434/442 (98%), Gaps = 3/442 (0%)
Strand = Plus / Minus
Query: 1 caagagctgatacagaaatgcacagttttgaagactaccattatatcatgagtgtactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 caagagctgatacagaaatgcacagttttgaagactaccattatatcatgagtgtactta 759
Query: 61 ctccattggccaaagtagatcatgtggtagattccaggaggaaaagccttggatagaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ctccattggccaaagtagatcatgtggtagattccaggaggaaaagccttggatagaggg 699
Query: 121 aagctattacttgggagccattattgtttttgtttttttttgttgttgttgttgttgtta 180
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 698 aagctattacttgggagccattattgtttttg--ttttgttgttgttgttgttgttgtta 641
Query: 181 tatctgctataagaaacatacatgtctcctctgtatggaaataaataataattttaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tatctgctataagaaacatacatgtctcctctgtatggaaataaataataattttaagac 581
Query: 241 tttgtttaaatgattattttctagtttttaaataggtttcacgatttttctggccaagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tttgtttaaatgattattttctagtttttaaataggtttcacgatttttctggccaagtc 521
Query: 301 actattgctagtgacattgatgatctttcatttccaatagaggatggctttcctgaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 actattgctagtgacattgatgatctttcatttccaatagaggatggctttcctgaaatc 461
Query: 361 ccactgatataagtagatcaggaaggattgttttgttttgttttgtctttcatacctgga 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 460 ccaccgatataagtagatcaggaaggattgttttgttttgttttgtctttcatacatgga 401
Query: 421 actaacagtgtggtattaaggc 442
||||||| || ||||| |||||
Sbjct: 400 actaacaatggggtat-aaggc 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
