CTGTCTTCTACCTCTTCCTTCTTCCTTCTCCTTTTTTTTCTCTCTCTCGC
GGTTTGCCGTTACTACCCTTTATTTTCCAGAAGTCACCCGCTGCCATACC
CTCTCGTTTCTGCTTCTATGATATTTTCATTTTTTCTTATCTGCCGCCTT
TGCTTCCTACGCTTTCTTGTAACGTCCCACCCTTTCTTTTGTAGTCCCCC
TTTATCATACTCGCTTGCGACTATTTTATATCCCTCCACTATCCTCGAAT
CTTTACTGTAATATGGGCAATCAGAATTCCCTTCTCCCCCTCATCCCTCG
CTTGGTTTGGGTACCTCCTTTTCGTCCCCTTTACTTGGAACTGTTTGCCC
CCCTCTTTGGCCTCCTGGCCCCAACACCCCCTCTTGGCTAAGTCCCTTCC
TCTTAATTGCTTCTTCCCACTTTTTGTGCCCGACCTTCCTCTCACCCATT
CTCCTTATTCTTCTTTATTCCCCCCCCCTCCCTTCTGTCCTTCGCCCTTC
CCTGTGGTTACCCATCGGGTAAAATTTTTTTTTTTTTCCCCTCCTGTGGC
GGACCCCCCCCTATCCTTTCCCCCTCCTCTATGGTTCCCGCCTTTTTTCC
CCCCCCTTATTTTCTCCTCCCCCCCCTCTCTTTCCCCAATTATAGCTTGT
TTTCCCCCCCCACCTTCGCGTCCCCCTTCCCGGTTCCCGCTTTCCCCTTT
ACCTTACCCGCTTTCCACCTTTCCCCCTTTTTTCTTCCTCCCCCCCCCCC
TCCCTTCTTTTCTCCCTCTTTT

GGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTAGGATAGAGACAGTCTCAGAGATTTACCCGGG
GAAGATGTGACAAGGCCAATGCGTGGTACCTGAGCACAGGTAACCATCAC
GTGGGAGAATGTTGATCAGAATGCATGGGTTATATCAAGTTATGATCTAG
TCAGGTAAAAGCCTAGCTTTATGGCCAAGGTATTTGTAAATATATTTTGA
GTCTGAGAACATGGGGACCATGGGGCCGGGAGGAAGAATCAAATGTAACT
TCTACAATGAAGCCACGTGAAGAATCTAAAGTAAGATGGCACCATAGTGC
ATGAGTGGAAAACAGATGACCCAGTGGTCTGCTCCCTATGTGCTGCCTTT
GACAAGGATGCACAGGGATGTGTGGTTGTGTACACCTGTTGATACTTATA
GATACATGAGAAAAAAATACAAGAATGATAATTAACTTGATTAATTAAGA
GAGCTAATATCAATTACTTTTTTTAAAGTAGGCTTAAATGACTTCTTGAG
CACAGGTGTCTCCCAAGCGAGACCACCTCCATCTGGTATGAGCAGAAAAG
ACCTCTTGTGCATTGAATGTTGTGNAAAAAGGAAGGGATACCCCACCCCC
AAACAAAGAAAAAANGGTTGGTTTCCCTCCCAAAGGCGGCCCCCTGGTTC
GAAAAAACTTTTTTGCTTCTCCGGATTAATACAAANTTGCCTATCTACGC
AGAGCCTATTTTTTTTTCCGGGATTTG

Query= MSMg01no348_m23.g1 MSMg01no348_m23.g1 CHROMAT_FILE:
MSMg01no348_m23.g1 PHD_FILE: MSMg01no348_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:14 2005
         (443 letters)



>mm_chr19_31718305_31719146
          Length = 842

 Score =  810 bits (419), Expect = 0.0
 Identities = 437/443 (98%), Gaps = 2/443 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taggatagagacagtctcagagatttacccggggaagatgtgacaaggccaatgcgtggt 60
           |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 202 taggatagagacagtctcagagatttaccc-gggaagatgtgacaaggtcaatgcgtggt 260

                                                                       
Query: 61  acctgagcacaggtaaccatcacgtgggagaatgttgatcagaatgcatgggttatatca 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 acctgagcacaggtaaccatcacgtgggagaatgtcgatcagaatgcatgggttatatca 320

                                                                       
Query: 121 agttatgatctagtcaggtaaaagcctagctttatggccaaggtatttgtaaatatattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttatgatctagtcaggtaaaagcctagctttatggccaaggtatttgtaaatatattt 380

                                                                       
Query: 181 tgagtctgagaacatggggaccatggggccgggaggaagaatcaaatgtaacttctacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagtctgagaacatggggaccatggggccgggaggaagaatcaaatgtaacttctacaa 440

                                                                       
Query: 241 tgaagccacgtgaagaatctaaagtaagatggcaccatagtgcatgagtggaaaacagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaagccacgtgaagaatctaaagtaagatggcaccatagtgcatgagtggaaaacagat 500

                                                                       
Query: 301 gacccagtggtctgctccctatgtgctgcctttgacaaggatgcacagggatgtgtggtt 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 gacccagtggtctgctccctatgtgctgcctttgagaaggatgcacagggatgtgtggtt 560

                                                                       
Query: 361 gtgtacacctgttgatacttatagatacatgagaaaaaaatacaagaatgataattaact 420
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 561 gtgtacacctgttgatacttatagatacatgagaaaaaa-tacaagactgataattaact 619

                                  
Query: 421 tgattaattaagagagctaatat 443
           |||||||||||||||||||||||
Sbjct: 620 tgattaattaagagagctaatat 642


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 842
Length adjustment: 10
Effective length of query: 433
Effective length of database: 832
Effective search space:   360256
Effective search space used:   360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)