Query= MSMg01no356_e21.b1 MSMg01no356_e21.b1 CHROMAT_FILE:
MSMg01no356_e21.b1 PHD_FILE: MSMg01no356_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:59 2005
(529 letters)
>mm_chr19_3793499_3794426
Length = 928
Score = 992 bits (513), Expect = 0.0
Identities = 525/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Minus
Query: 1 ttaactgccattctttttaggtatacaataaagctggtgagaaaaactatgacctgtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttaactgccattctttttaggtatacaataaagctggtgagaaaaactatgacctgtttg 559
Query: 61 tttgacttctagaaaggggaaatctggaaggggaaagagtgtgcaaggcttccttcccgt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 558 tttgacttctagaaaggggaaatctggaaggggaaagggtgtgcaaggcttccttcccgt 499
Query: 121 tcctgtcttccctgacaatcagagcttattaaacctggtgttccaattcttcctagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcctgtcttccctgacaatcagagcttattaaacctggtgttccaattcttcctagatga 439
Query: 181 tcatggacatagggctacaagaagcctatgtatgatggagatgagaaggaatgggcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcatggacatagggctacaagaagcctatgtatgatggagatgagaaggaatgggcccag 379
Query: 241 agtgcatcttatctccatatcatctggtggaaccatttccaccagacccaaaacccttta 300
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 378 agtgcatcttatctccatatca-ctggtggaaccgtttccaccagacccaaaacccttta 320
Query: 301 ccatagaaccaaagagtgaaagaattctaagatgatcttagtatctttcctaagagaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccatagaaccaaagagtgaaagaattctaagatgatcttagtatctttcctaagagaaca 260
Query: 361 atggttcttaagaggactacaggagtcagagacctcagacctgagtctaagaaccagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atggttcttaagaggactacaggagtcagagacctcagacctgagtctaagaaccagagc 200
Query: 421 aggcatggtgtacatgtcttcaatcccagcactcagaaagtgaggcttgccttctctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aggcatggtgtacatgtcttcaatcccagcactcagaaagtgaggcttgccttctctttt 140
Query: 481 ctctcacattctctctcccctacacagacacacacacacacacagacac 529
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 139 ctctcacattctctctcccctacacagacacacacacacacacacacac 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 928
Length adjustment: 10
Effective length of query: 519
Effective length of database: 918
Effective search space: 476442
Effective search space used: 476442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_e21.g1 MSMg01no356_e21.g1 CHROMAT_FILE:
MSMg01no356_e21.g1 PHD_FILE: MSMg01no356_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:59 2005
(132 letters)
>mm_chr19_3601683_3602214
Length = 532
Score = 240 bits (124), Expect = 3e-68
Identities = 130/132 (98%)
Strand = Plus / Plus
Query: 1 cagggctacctagaaactatgtctcaaaggccaactgacaaatagatgataaaaatagac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 201 cagggctacctagaaactatgtctcaaaggcaaactgacaaatagatgataaatatagac 260
Query: 61 aagtgacagagatggatggatggacggatggacagaatgatattggtagaagtgtgggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgacagagatggatggatggacggatggacagaatgatattggtagaagtgtgggta 320
Query: 121 ggtgggtaggta 132
||||||||||||
Sbjct: 321 ggtgggtaggta 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 532
Length adjustment: 8
Effective length of query: 124
Effective length of database: 524
Effective search space: 64976
Effective search space used: 64976
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
