Query= MSMg01no357_i11.b1 MSMg01no357_i11.b1 CHROMAT_FILE:
MSMg01no357_i11.b1 PHD_FILE: MSMg01no357_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:33 2005
(459 letters)
>mm_chr19_23938721_23939579
Length = 859
Score = 843 bits (436), Expect = 0.0
Identities = 451/458 (98%), Gaps = 5/458 (1%)
Strand = Plus / Plus
Query: 5 gaattctcagtttcc---ctgtgaacttctaaagtaaatttaacttggggttggcgactt 61
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcagt--ccaaactgtgaacttctaaagtaaatttaacttggggttggcgactt 261
Query: 62 atctcagtgctagagaggttacttagcaaatgcaaggccctgagttccgtcttcagctct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atctcagtgctagagaggttacttagcaaatgcaaggccctgagttccgtcttcagctct 321
Query: 122 aggggatgggagggaggcagtagatttatctttccaatttcaaaattcatcacacatcag 181
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggggacgggagggaggcagtagatttatctttccaatttcaaaattcatcacacatcag 381
Query: 182 aaaatgtataaatcccagaaggataaagacacgttcccaccagcggaagcctcgctgtct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaatgtataaatcccagaaggataaagacacgttcccaccagcggaagcctcgctgtct 441
Query: 242 cttcacatgttccttatttccactgaagaggtgtcttccacctgggtcttccatgacatt 301
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 442 cttcacatgttccttatttccactgaagaggtgacttccacctgggtcttccatgacatt 501
Query: 302 taaaagccaatttgttgaaggtcacccagcggtaagctaattggcttaaacatcctgttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 taaaagccaatttgttgaaggtcacccagcggtaagctaattggcttaaacatcctgttt 561
Query: 362 tcaaactctctttctagcatctaaaaatcatttaagggatgagcccaaaatagcaggagc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcaaactctctttctagcatctaaaaatcatttaagggatgagcccaaaatagcaggagc 621
Query: 422 caggaggctgtagaataaccattgtgggttggagttta 459
||||||||||||||||||||||||||||||||||||||
Sbjct: 622 caggaggctgtagaataaccattgtgggttggagttta 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_i11.g1 MSMg01no357_i11.g1 CHROMAT_FILE:
MSMg01no357_i11.g1 PHD_FILE: MSMg01no357_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:33 2005
(458 letters)
>mm_chr19_24137009_24137866
Length = 858
Score = 603 bits (312), Expect = e-177
Identities = 331/348 (95%), Gaps = 17/348 (4%)
Strand = Plus / Minus
Query: 1 atatggacttttggtaacatttttgctttatgtctttatgtttcttgtgtttctatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atatggacttttggtaacatttttgctttatgtctttatgtttcttgtgtttctatgttg 272
Query: 61 gttgtttatctgttgagatggacagccatccagtttcagatggggcttcttcgtgaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gttgtttatctgttgagatggacagccatccagtttcagatggggcttcttcgtgaacag 212
Query: 121 ccttccttgaaagtgggggagtgcttgcctagcacacaggagactctggggtcagccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ccttccttgaaagtgggggagtgcttgcctagcacacaggagactctggggtcagccaca 152
Query: 181 gcaccataaattaaaagcaaagcaaaactaaacaaaacactagaagaaaaacaaattaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gcaccataaattaaaagcaaagcaaaactaaacaaaacactagaagaaaaacaaattaaa 92
Query: 241 aaagagagccctggggactggagagatggcttagcaggtaagagcactgactgctcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 aaagagagccctggggactggagagatggcttagcaggtaagagcactga---------- 42
Query: 301 gaaggtcctgagttcaaatcccagcaaccacatggtggctcacaacca 348
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 -------ctgagttcaaatcccagcaaccacatggtggctcacaacca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
