Query= MSMg01no358_b14.b1 MSMg01no358_b14.b1 CHROMAT_FILE:
MSMg01no358_b14.b1 PHD_FILE: MSMg01no358_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:17 2005
(495 letters)
>mm_chr19_38121479_38122373
Length = 895
Score = 926 bits (479), Expect = 0.0
Identities = 488/491 (99%), Gaps = 1/491 (0%)
Strand = Plus / Plus
Query: 5 gaattcattaattataactaatacaaattgtggtgtgtgtgattgggggggggcgaagtg 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 206 gaattcattaattataactaatacaaattgtggtgtgtgtgattgggggggg-cgaagtg 264
Query: 65 ttaggcagcagagtgaatatgattttgctgtggttctaaaactattctaaaaataaagcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaggcagcagagtgaatatgattttgctgtggttctaaaactattctaaaaataaagcc 324
Query: 125 tacttaaaaatgacacatgaataaagcaaaggaatgcctgcctcactggtaaggaatttt 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tactttaaaatgacacatgaataaagcaaaggaatgcctgcctcactggtaaggaatttt 384
Query: 185 tcacattaataaaatgttaattttctaagaattcatggttaggtattcaagttgtagaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcacattaataaaatgttaattttctaagaattcatggttaggtattcaagttgtagaga 444
Query: 245 agtcccaagtacatgcaacaaccacaaggagtcacagactatcgtgcgactcaaaatcaa 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 agtcccaagtacatgcaacaaccacaaggagtcacagactatcatgcgactcaaaatcaa 504
Query: 305 tccaatgtcttggcatcgttgttttaaattttcttaaatttctacaagagaaatattatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccaatgtcttggcatcgttgttttaaattttcttaaatttctacaagagaaatattatc 564
Query: 365 ttaaatatggcttaaggtacatcaagcatatttgataagatgcatccaatttgaacctgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaaatatggcttaaggtacatcaagcatatttgataagatgcatccaatttgaacctgt 624
Query: 425 aaaattgttaaataagccatgagaaggatcaattcccaagctctgagcattaatttcctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaattgttaaataagccatgagaaggatcaattcccaagctctgagcattaatttcctg 684
Query: 485 gattcctggat 495
|||||||||||
Sbjct: 685 gattcctggat 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_b14.g1 MSMg01no358_b14.g1 CHROMAT_FILE:
MSMg01no358_b14.g1 PHD_FILE: MSMg01no358_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:17 2005
(443 letters)
>mm_chr19_38279466_38280306
Length = 841
Score = 783 bits (405), Expect = 0.0
Identities = 433/443 (97%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 1 atggtttttatttgttactcttggtgcaaattattgtggtggaaattgttctttgtataa 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 atggtttctatttgttactcttggtgcaaattattgtggtggaaattgttctttgtataa 582
Query: 61 atcatttttattttctctttctctttttctgccaaaatagttttgagttgtgctttcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 581 atcatttttattttctctttctctttttctgccaaaatagttttgagttgtgctt--atg 524
Query: 121 tccaaatcatttttttgtccttagaagtttttagctagaattttatgtaaatgatatatt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 523 tccaaatcatttttttgtccttagaagtttttagatagaattttatgtaaatgatatatt 464
Query: 181 tgaaaacattaatttaacatttagttaaatactgaaaggactgacatctaagagcatgtc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 463 tgaaaacattaatttaacatttagctaaatactgaaaggactgacatctaagagcatgtc 404
Query: 241 ttttgggaaatgatctctttcagggttttagttagtacacttactatttcactttctaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttttgggaaatgatctctttcagggttttagttagtacacttactatttcactttctaaa 344
Query: 301 gtataagattctctaatatggactcactaaaattctacttaaataaacagtttaccaaca 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gtgtaagattctctaatatggactcactaaaattctacttaaataaacagtttaccaaca 284
Query: 361 ggaattgtgtgccagtttttgttttaagagttcagctctttaacttggtctggtggcaca 420
||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 283 ggaattgtgtgccagcttttgttttaagagttcagctctttagcttggtccggtggcaca 224
Query: 421 gtctcatggtcccagctaccctg 443
|||||||||||||||||||||||
Sbjct: 223 gtctcatggtcccagctaccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 841
Length adjustment: 9
Effective length of query: 434
Effective length of database: 832
Effective search space: 361088
Effective search space used: 361088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
