Query= MSMg01no361_e15.b1 MSMg01no361_e15.b1 CHROMAT_FILE:
MSMg01no361_e15.b1 PHD_FILE: MSMg01no361_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:17 2005
(625 letters)
>mm_chr19_22583343_22584367
Length = 1025
Score = 1085 bits (561), Expect = 0.0
Identities = 614/643 (95%), Gaps = 22/643 (3%)
Strand = Plus / Plus
Query: 5 gaattcttcagtcatgttagtttaatgttccttttatatattttttaaaatttaatttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gaattcttcagtcatgttagtttaatgttccttttatatattttttaaaatttaatttaa 242
Query: 65 aatataataattcaataatttccttctttctctttcttccccttaatccttcatatgtac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aatataataattcaataatttccttctttctctttcttccccttaatccttcatatgtac 302
Query: 125 atgtgtccggccacctcccaaccttttgagctcatgacctttctttatttatttttatat 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 303 atgtgtccggccacctcccaaccttttgagctcatgaccttcctttatttatttttatat 362
Query: 185 atttttattatgtaaaacaaccttcaattttacatatattttggttatattcttcccttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atttttattatgtaaaacaaccttcaattttacatatattttggttatattcttcccttc 422
Query: 245 ccccaagactttgttgttacactcaagcacacatacacccacagagagagagagagaga- 303
|||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 423 ccccaagactttgttgttacactcgagcacacatacacctacagagagagagagagagag 482
Query: 304 -cagagagaga--------cagagagagacagagagagacagaga------gagacagag 348
|||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 483 acagagagagagacagagacagagagagacagagagagacagagacagagagagacagag 542
Query: 349 aga--cagagtgacagagagacagacaga----gacagacagacagagagactgagagac 402
||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 543 agagacagagtgacagagagacagacagacagagacaaacagacagagagactgagagac 602
Query: 403 agagagagatagcatacacatagcatacatagagaaaggagggtcttttccaggtcaggt 462
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agagagagatagaatacacatagcatacatagagaaaggagggtcttttccaggtcaggt 662
Query: 463 ggtatattaaagagatttttaatggcttaggaccacttatttatacattaaataatgaat 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ggtatattaaagagatttttaatggcttaggaccacttatttatacattaaataatgaat 722
Query: 523 cctttcaatcttgggcactgtccatataaaactcccttgatgttggaataccatagatgt 582
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 723 cctttcaatcttgggcactgtccatataaaactcccttgatgttggaatgccatagatgt 782
Query: 583 acttttgaaaagatactggaaaataaggttgagtacagcagac 625
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 783 actttttaaaagatactggaaaataaggttgagtacagcagac 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_e15.g1 MSMg01no361_e15.g1 CHROMAT_FILE:
MSMg01no361_e15.g1 PHD_FILE: MSMg01no361_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:17 2005
(511 letters)
>mm_chr19_22757925_22758835
Length = 911
Score = 957 bits (495), Expect = 0.0
Identities = 507/511 (99%)
Strand = Plus / Minus
Query: 1 aaatgtatgcataaagaatcttagaaggtagcacaacaaatacagaccatggctcatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aaatgtatgcataaagaatcttagaaggtagcacaacaaatacagaccatggctcatatg 652
Query: 61 cagaccctagcttacagtgtttaaatgtagatatctaagtagggctgagtctgggtatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cagaccctagcttacagtgtttaaatgtagatatctaagtagggctgagtctgggtatag 592
Query: 121 gctatgaaattagagaggagcccatgagagggacaaagaggagccgaagatggggcaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gctatgaaattagagaggagcccatgagagggacaaagaggagccgaagatggggcaggg 532
Query: 181 gtagtaaagcacgtgagagcagacaggagactgtgcagagtgtggaaggtaagagaggct 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 531 gtagtaaagcacgtgagagcagacaggagactgtggagagtgtggaaggtaagagaggct 472
Query: 241 gggagggagagagaaagggaacttcctcaaaccaaattttgtttgaaaatgtaacaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gggagggagagagaaagggaacttcctcaaaccaaattttgtttgaaaatgtaacaatga 412
Query: 301 aacccatttgtataaacacaagtttaaaaatttaaagaggaaaatctaaacagaggctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aacccatttgtataaacacaagtttaaaaatttaaagaggaaaatctaaacagaggctca 352
Query: 361 actgagaaggtctaattgtatatttaacacatgtattaaagccagtgctacctgaaacat 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 actgagaaggtctaattgcatatttaacacatgtattaaagccagtgctacctgaaacat 292
Query: 421 gggctttgagtccgtgtctagaggatttgaaaatggttcctccgtgtatcttttagaatc 480
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gagctttgagtcggtgtctagaggatttgaaaatggttcctccgtgtatcttttagaatc 232
Query: 481 gtattgtttgattcattcattttatcttatg 511
|||||||||||||||||||||||||||||||
Sbjct: 231 gtattgtttgattcattcattttatcttatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
