Query= MSMg01no361_p16.b1 MSMg01no361_p16.b1 CHROMAT_FILE:
MSMg01no361_p16.b1 PHD_FILE: MSMg01no361_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:10 2005
(448 letters)
>mm_chr19_57326089_57326936
Length = 848
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%)
Strand = Plus / Minus
Query: 137 ttaacagtagcttttagagaattgaagtacttaaatttaatgaagttaaccgtggtccat 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ttaacagtagcttttagagaattgaagtacttaaatttaatgaagttaaccgtggtccat 789
Query: 197 cagttgtgattttagtatcccatctgaagaaccttggcccaagcagatggtaacagaagt 256
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 788 cagttgtgattttagtatcccatctgaagaatcttggtccaagcagatggtaacagaagt 729
Query: 257 aatccttttttttccctaaaactctataagtttatatgttgtgtttagatctatgattca 316
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aatcctttttttttcctaaaactctataagtttatatgttgtgtttagatctatgattca 669
Query: 317 tggtccattttgtaatttttcccctggtatgaatgtcactgttgttcctttactcatttg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tggtccattttgtaatttttcccctggtatgaatgtcactgttgttcctttactcatttg 609
Query: 377 tatatttttagaaaattcattaataatatatacatatggatctgtttctagattgttgtt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tatatttttagaaaattcattaataatatatacatatggatctgtttctagattgttgtt 549
Query: 437 tccttgatcaat 448
||||||||||||
Sbjct: 548 tccttgatcaat 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_p16.g1 MSMg01no361_p16.g1 CHROMAT_FILE:
MSMg01no361_p16.g1 PHD_FILE: MSMg01no361_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:10 2005
(464 letters)
>mm_chr19_57192891_57193755
Length = 865
Score = 853 bits (441), Expect = 0.0
Identities = 459/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 1 caataaaatgcatttcaggctaatagaagaagtgtctgtcgctaccatgaaccgacaaca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caataaaatgcatttcagggtaatagaagaagtgtctgtcgctaccatgaaccgacaaca 260
Query: 61 tgtagaggttcccagcgactccctggcttgcccaccggagagccagcaaatgcctccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagaggttcccagcgactccctggcttgcccaccggagagccagcaaatgcctccaag 320
Query: 121 gggaaggatacttttgcaaagcacactttaccttgtgccagggtccgtgggtttgatcct 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gggaaggatacttttgcaaagcacactttaccttgtgccagggtccgggggtttgatcct 380
Query: 181 gtttcttggctctcctgggtagaactcctctgagctgccagctcagaacaccttggacat 240
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gtgccttggctctcctgggtagaacttctctgagctgccagctcagaacaccttggacat 440
Query: 241 gctagacctcaacctggtagactgaggcccgtgctggctacctgcccagctggctcacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctagacctcaacctggtagactgaggcccgtgctggctacctgcccagctggctcacac 500
Query: 301 agcaggcttcactaggctgcagccacgcacatctccccagagactcacacaggaaacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcaggcttcactaggctgcagccacgcacatctccccagagactcacacaggaaacaag 560
Query: 361 agcagttgtggcaggctccc-cctctcaacgcctcctctccttgcctcactgactaaaca 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcagttgtggcaggctccctcctctcaacgcctcctctccttgcctcactgactaaaca 620
Query: 420 cagcagcagccacgacgggccagtccatgttccagaaaagcaggg 464
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcagcagccacgacgggccagtccatgttccagaaaagcaggg 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
