NNAGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATTCTTTTTACTAGCTGAGTAGTACTCCATTGTGTAAAT
GTACCACATTTTCTCTATCCATTACTCTCTTGAGGGACATCTGGGGTCTT
TCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCAT
GTGTCCTTATTACATGTTGGAGCATCTTCTGGGTATATGCCAAGGAGTGG
TATAGCTGGGTCCTCAGGTAGTACTATGTCCAATTTTCTGAGGAACCACC
AGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACTAGCAATGG
AAGAGTTTTCCTCTTTCTCCACATCCTCACCAGCATCTTCTGTCACCTGA
ATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTAT
ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTCCATAATG
TTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCT
CTAGCTCCTCCATTGGGAGCACTGTGATCCATCCAATAGATGACTGTGAG
CATCATGTGTTTAGCAAATTGTATCTTATATCTTGGGGATCCTAGGTTTT
GGGCTAATATCCCCTGAACAGTGGAGACATATTGTGGGAAGTCCCTTGTG
AAAGGGTTTACCCCCCTCCGGAAGAAGGCCTTCCCCGGCCATCCCTTTTG
GTTAGAAATTTC

NNNNNCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGTTTGAAGTTCAGCTT
CACAAAGTGTGAAGTATGAATACAGCTCTGCCTTGTATACAAGATTTTCC
AAAAGGGAAAAAAAAATCTTTTGAAAACAAAAGCTGAAAGACTTGGTGCT
AAACTTCAAGTTTCACTGACATGAATACACCAGAGGTATAGTTTAATAAG
GAAAATTGCCATTTTCCTATGATTGTGTTTGTGTGCTCTCAGGACAGATC
TAAAAATGAATTAGCTTTGAGTGTACATATTGCAAAACTCAGAGATACCA
GAATAATCAAAGTAATAATGATATCCTAATGCCTTGCTTGCCTGGAACTC
AGCTCTGCTTCTGGGAATATAATTGATAGATGTATTGAAGTAGCTCAGAT
TTGCTTTGTCAGGCAATGTAATAGAAAGTCAAAGTGACCTCTAAAATATT
TGTTTTCTCTTCAGAAACACAAATGGAAAAATCTCACATAGCCTGTCATT
ACAATATAGTTATGCTCAAGGAATTTAAGTTCAAGAAATTTAATTTTTAA
GTGCATTTTTCTCTTACAGACACCNATATCAATATAGCACTTGTATTGAA
CTATCCACTACTCTGACAAAGTGTTCCTGTTCCTTACAAGACATTAAAGT
GGTGATTTCAACCATAAAAATTGTCTAAAAGGCCCCTTTTGGTTCTTTGA
AAAAAAGAAAACA

Query= MSMg01no366_c18.g1 MSMg01no366_c18.g1 CHROMAT_FILE:
MSMg01no366_c18.g1 PHD_FILE: MSMg01no366_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:56 2005
         (472 letters)



>mm_chr19_19400080_19400951
          Length = 872

 Score =  905 bits (468), Expect = 0.0
 Identities = 471/472 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgtttgaagttcagcttcacaaagtgtgaagtatgaatacagctctgccttgtatacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttgtttgaagttcagcttcacaaagtgtgaagtatgaatacagctctgccttgtatacaa 613

                                                                       
Query: 61  gattttccaaaagggaaaaaaaaatcttttgaaaacaaaagctgaaagacttggtgctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gattttccaaaagggaaaaaaaaatcttttgaaaacaaaagctgaaagacttggtgctaa 553

                                                                       
Query: 121 acttcaagtttcactgacatgaatacaccagaggtatagtttaataaggaaaattgccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acttcaagtttcactgacatgaatacaccagaggtatagtttaataaggaaaattgccat 493

                                                                       
Query: 181 tttcctatgattgtgtttgtgtgctctcaggacagatctaaaaatgaattagctttgagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttcctatgattgtgtttgtgtgctctcaggacagatctaaaaatgaattagctttgagt 433

                                                                       
Query: 241 gtacatattgcaaaactcagagataccagaataatcaaagtaataatgatatcctaatgc 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 432 gtacatattgcaaaactcagagataccagaataattaaagtaataatgatatcctaatgc 373

                                                                       
Query: 301 cttgcttgcctggaactcagctctgcttctgggaatataattgatagatgtattgaagta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cttgcttgcctggaactcagctctgcttctgggaatataattgatagatgtattgaagta 313

                                                                       
Query: 361 gctcagatttgctttgtcaggcaatgtaatagaaagtcaaagtgacctctaaaatatttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gctcagatttgctttgtcaggcaatgtaatagaaagtcaaagtgacctctaaaatatttg 253

                                                               
Query: 421 ttttctcttcagaaacacaaatggaaaaatctcacatagcctgtcattacaa 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttctcttcagaaacacaaatggaaaaatctcacatagcctgtcattacaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)