CTACCTATCGGGAGAGGATCCGCGGAATTCACACTTATATAAAACTTGTG
ACTCATTTCAAAATAGCATTTCTTTTTAAAATTTAAAACAAACTCAGAAA
ATCCATTGTTTTTGTCATGTTTTGTTTTTACTAAACTTTATTTAGCTCAC
AGGGTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAA
TCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTC
AATCAAGGAGGCTCTTTTGGATGGTTTTTTTTCGTGGAAACTAAGATGAT
ACTTGAAATACAGACCAGTTAGATTATAACATTAAGCATGTTTTGGACTT
TTTGTCTTCGGCGCTGCCTCCTAAATCTGTGGCAGCTAGTGAAAGACCAG
AAAAAAGCATCAGGAGTCAGTGTGATACAGTGCTCGTCTTCTTACATCCC
TGTGGTATTTGTATCAGATCTATAATAGGGTTTGACTATTTAAAACCAAT
TGTTTATTCACAATTGGCTCACTTAAACATCAAACTCATGAGGCTGGAAA
GATGGCCCGGCAGTTTAGAGCACTGGCTCTTGCAGAGGTAGTCCTTTATT
CTCTGCACCAACATGATGGCTCACAACCATCTGTAACTCCAGTTCCCAAG
GATCTGATACCCTTCTTCTGACCTCTAACGGCAAAAAAAAAACCCCATGG
TGGGCATATAACTTGCGGGGCAAGTACTCCCCCTAT

NTCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGTTTGATTCAAATAAT
TTTAGGAAGAAAGTTTCTTAAGGAGAAAGGTTAATGGTTTTAGTTGCTTT
GCCAGAAAGATGTAATAAAGTTAGACTCAAGAATAGAATATGCCGGGGGT
GGATATGGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATA
CCTAATAAAAAAAAGAATAGAATATGCCCCCTCCTCATATAATAGTAAGT
AAAGGCTTCATAATAAGGCATACGATGAGCTTTCTTTCATAAATTACACT
AAGAAGAGAAATAGGTGTGGGAAAAATTTGATATCAAGGAAAACCTTTCA
TTCTAGGTCAGATTCAAGTATGCAGCCATATATTCACTATGATGAAGCCA
AGCCATGTGAAACTGTTGCTCTGAACTTATAGTGAGCTTACAGAATAAAA
CATTCCTTTGAACTTACTATCAACATCCTTTTGTAACTCCCCTTTTGTGT
AGCATCCTATCTATGAAGTAATTTTATACAGAACTTTTGTCTAAGAAGGT
ATAAATTGACCGAGAATAGAAATAAAGTGTGCCTTTGGGACTCTGTCCCC
TCCCCCTGAGATAGTTAGATAGATAGATAGATTGATTGATTGATTGATAG
ATTGTTTGGTCCCTGCCTTATTTATTTACCTTTCTTTCCTTTTACCCTTC
TCTCTTTCCN

Query= MSMg01no367_a07.b1 MSMg01no367_a07.b1 CHROMAT_FILE:
MSMg01no367_a07.b1 PHD_FILE: MSMg01no367_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:03 2005
         (540 letters)



>mm_chr19_38257778_38258718
          Length = 941

 Score =  967 bits (500), Expect = 0.0
 Identities = 512/516 (99%), Gaps = 1/516 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  tatataaaacttgtgactcatttcaaaatagcatttctttttaaaatttaaaacaaactc 85
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatataaaacttgtgactcatttcaaaatagcatttctttttaaaatttaaaacaaactc 682

                                                                       
Query: 86  agaaaatccattg-tttttgtcatgttttgtttttactaaactttatttagctcacaggg 144
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaaaatccattgttttttgtcatgttttgtttttactaaactttatttagctcacaggg 622

                                                                       
Query: 145 tttccaggtcagcaatggataatctgtgggtagtcacatggcagaatctctggggctctt 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttccaggtcagcaatggataatctgtgggtagtcacatggcagaatctctggggctctt 562

                                                                       
Query: 205 cctcttctgtcacttcttggtcactggacagaactcaatcaaggaggctcttttggatgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 561 cctcttctgtcacttcttggtcactggacagaactcaatcaaggaggctcttttggatgt 502

                                                                       
Query: 265 ttttttttcgtggaaactaagatgatacttgaaatacagaccagttagattataacatta 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttttttcgtggaaactaagatgatacttgaaatacagaccagttagattataacatta 442

                                                                       
Query: 325 agcatgttttggactttttgtcttcggcgctgcctcctaaatctgtggcagctagtgaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcatgttttggactttttgtcttcggcgctgcctcctaaatctgtggcagctagtgaaa 382

                                                                       
Query: 385 gaccagaaaaaagcatcaggagtcagtgtgatacagtgctcgtcttcttacatccctgtg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccagaaaaaagcatcaggagtcagtgtgatacagtgctcgtcttcttacatccctgtg 322

                                                                       
Query: 445 gtatttgtatcagatctataatagggtttgactatttaaaaccaattgtttattcacaat 504
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 gtatttgtatcagatctataatagggtttgactgtttaaaaccaattgtttattcacaat 262

                                               
Query: 505 tggctcacttaaacatcaaactcatgaggctggaaa 540
           |||||||||||||||||||||||||| |||||||||
Sbjct: 261 tggctcacttaaacatcaaactcatggggctggaaa 226


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 941
Length adjustment: 10
Effective length of query: 530
Effective length of database: 931
Effective search space:   493430
Effective search space used:   493430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)