Query= MSMg01no370_k14.b1 MSMg01no370_k14.b1 CHROMAT_FILE:
MSMg01no370_k14.b1 PHD_FILE: MSMg01no370_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:47 2005
(385 letters)
>mm_chr19_29745574_29746359
Length = 786
Score = 588 bits (304), Expect = e-172
Identities = 328/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatctgaatta-aaacctccgcctcagggtctgttgatcttacaaagcccttc 62
|||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 336 ggaattccatctgaattacaaacctctgcctcagggtctgttgctcttacaaagcccttc 277
Query: 63 ttagctttctgatttcaaaatctgggtttgagatggattaataagtcacacagtaccagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttagctttctgatttcaaaatctgggtttgagatggattaataagtcacacagtaccagg 217
Query: 123 ttaaaaaataaatggacaggtgagattactaaacaggtgaaggtgcttgtcttagcaagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttaaaaaataaatggacaggtgagattactaaacaggtgaaggtgcttgtcttagcaagc 157
Query: 183 cttacttccattccaggaacctacgagaatttggagagagctaactttttaggcctgttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cttacttccattccaggaacctacgagaatttggagagagctaactttttaggcctgttg 97
Query: 243 tctgacctccacacacgtggtggctgcacccccatctctctgtctctctctctctccctc 302
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 96 tctgacctcaacacacgtggtggctgcacccccatctctctctctctctctctctctctc 37
Query: 303 tccctctccctctctctctctctctctctctctctc 338
|| ||||| |||||||||||||||||||||||||||
Sbjct: 36 tctctctctctctctctctctctctctctctctctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 103
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 786
Length adjustment: 9
Effective length of query: 376
Effective length of database: 777
Effective search space: 292152
Effective search space used: 292152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_k14.g1 MSMg01no370_k14.g1 CHROMAT_FILE:
MSMg01no370_k14.g1 PHD_FILE: MSMg01no370_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:47 2005
(357 letters)
>mm_chr19_29589906_29590661
Length = 756
Score = 658 bits (340), Expect = 0.0
Identities = 353/358 (98%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 1 tgagagcttgtgagaaaactgcaagaagacaagagttttgtgacctcagtttcttcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagagcttgtgagaaaactgcaagaagacaagagttttgtgacctcagtttcttcaaaa 260
Query: 61 cacagaattgttcttggaatgtgttttcatgctcctcccaggcatagcagataggagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagaattgttcttggaatgtgttttcatgctcctcccaggcatagcagataggagttt 320
Query: 121 cttcagctgttgtcattcgtatgcctctataggaaaagttgggttttgccacatgtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcagctgttgtcattcgtatgcctctataggaaaagttgggttttgccacatgtggct 380
Query: 181 tgtccttgtaactgaacacctttctccatgtttgtcttcctaaccctcagagtacaaatt 240
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 381 tgtccttgtaactgaacacctttctcc--gtttgtcttcctaactctcagagtacaaatt 438
Query: 241 gcccgatgctctgaataaagttggcttttgcatgagattttagtcttcctcgtgaatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcccgatgctctgaataaagttggcttttgcatgagattttagtcttcctcgtgaatgga 498
Query: 301 atgagtatcagctccattctcttaagtccc-gttgcctctagagcaataaacaagggg 357
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 499 atgagtatcagctccattctcttaagtccccgttgcctctagagcgataaacaagggg 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 756
Length adjustment: 9
Effective length of query: 348
Effective length of database: 747
Effective search space: 259956
Effective search space used: 259956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
