Query= MSMg01no370_m10.b1 MSMg01no370_m10.b1 CHROMAT_FILE:
MSMg01no370_m10.b1 PHD_FILE: MSMg01no370_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:56 2005
(364 letters)
>mm_chr19_4909596_4910359
Length = 764
Score = 654 bits (338), Expect = 0.0
Identities = 353/360 (98%), Gaps = 4/360 (1%)
Strand = Plus / Minus
Query: 5 gaattcaaggccaactggtctacatatggagactctatcttaaaagaaaaaaaaagagtc 64
|||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||
Sbjct: 739 gaattcaaggccaactggtctatatatggagactctatctta----aaaaaaaatgagtc 684
Query: 65 acctaggatgttgtagctcaggctgtactccctgtgttgccaaggatggccctgaactgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acctaggatgttgtagctcaggctgtactccctgtgttgccaaggatggccctgaactgc 624
Query: 125 tgatcctcctgcctctgccttccaagtgctgggattataggtgccaccatacccagctta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgatcctcctgcctctgccttccaagtgctgggattataggtgccaccatacccagctta 564
Query: 185 gccattagattggtagctctgaaattttataaaggacaaactgtagcacgtcctccccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gccattagattggtagctctgaaattttataaaggacaaactgtagcacgtcctccccag 504
Query: 245 ggctaggtaccactggccacggctgctgacagagccctgtgggtgcaaggtgagttccca 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 503 ggctaggtaccactggccacggctgctgacagagtcctgtgggtgcaaggtgagttccca 444
Query: 305 tcgtaggcacttgattcctccttcctgcaggtgctgaagtccacgggggacgtggtcgcg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcgtaggcacttgattcctccttcctgcaggtgctgaagtccacgggggacgtggtcgcg 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_m10.g1 MSMg01no370_m10.g1 CHROMAT_FILE:
MSMg01no370_m10.g1 PHD_FILE: MSMg01no370_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:56 2005
(343 letters)
>mm_chr19_4755910_4756652
Length = 743
Score = 656 bits (339), Expect = 0.0
Identities = 342/343 (99%)
Strand = Plus / Plus
Query: 1 ttaccccttcctacccaaacaagggagagattaggttaagatgtggtagtgcctgggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaccccttcctacccaaacaagggagagattaggttaagatgtggtagtgcctgggttt 260
Query: 61 ctgaagtatcgctctcagcagccagaggttgagaaaacccccttctagcgggcccagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaagtatcgctctcagcagccagaggttgagaaaacccccttctagcgggcccagtga 320
Query: 121 cacaaccctttgtcatcagccccctcgacagtgcgcccaataccacgatccattgtgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaccctttgtcatcagccccctcgacagtgcgcccaataccacgatccattgtgatg 380
Query: 181 cttagagacttccccgggccttacggttttgccaaggcaatggttgcttcctgagccccc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttagagactcccccgggccttacggttttgccaaggcaatggttgcttcctgagccccc 440
Query: 241 ttgacgcgcaagccgcgacccactcccaaggcggtgattggctagcccgggctgggggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgacgcgcaagccgcgacccactcccaaggcggtgattggctagcccgggctgggggcg 500
Query: 301 ggctgaccttcgctccgcagtgccgtcaccacatgaccccgcc 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggctgaccttcgctccgcagtgccgtcaccacatgaccccgcc 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
