Query= MSMg01no371_n07.b1 MSMg01no371_n07.b1 CHROMAT_FILE:
MSMg01no371_n07.b1 PHD_FILE: MSMg01no371_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:25 2005
(330 letters)
>mm_chr19_27018834_27019563
Length = 730
Score = 638 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Minus
Query: 1 ctaaattccttgagctcctgccaatatataagaacctggggctgttgccctggttcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctaaattccttgagctcctgccaatatataagaacctggggctgttgccctggttcacag 471
Query: 61 aagttctatgaactatgaggagggggtggggctgggggaaccacttaagagttgctatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aagttctatgaactatgaggagggggtggggctgggggaaccacttaagagttgctatga 411
Query: 121 atgaagtcttggccatacagaaaagatggagaaattcaacttctttaaagggttgtagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atgaagtcttggccatacagaaaagatggagaaattcaacttctttaaagggttgtagta 351
Query: 181 aaattagaggccaagggaaattcagagtcaaaggtatggatatgttgttttttgtctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aaattagaggccaagggaaattcagagtcaaaggtatggatatgttgttttttgtctctg 291
Query: 241 ggagaatcttgagtgaccccagtcctagggttgtattccactgcctttactagaacctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggagaatcttgagtgaccccagtcctagggttgtattccactgcctttactagaacctct 231
Query: 301 gtttgcatctgggttctctgagaatgactg 330
||||||||||||||||||||||||||||||
Sbjct: 230 gtttgcatctgggttctctgagaatgactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_n07.g1 MSMg01no371_n07.g1 CHROMAT_FILE:
MSMg01no371_n07.g1 PHD_FILE: MSMg01no371_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:25 2005
(388 letters)
>mm_chr19_26822849_26823636
Length = 788
Score = 687 bits (355), Expect = 0.0
Identities = 381/393 (96%), Gaps = 8/393 (2%)
Strand = Plus / Plus
Query: 4 ggaattctttctggttgtagtacttttagcattgtgttgcaagttttttttt--gttttt 61
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 196 ggaattctttctgggggtagtacttttagcattgtgttgcaagtttttttttttgttttt 255
Query: 62 gtttttgtttggtttcttttcttcttcttctt---ttttttaatctcccccccccc---a 115
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 256 gtttttgtttggtttcttttcttcttcttcttcttttttttaatctccccccccccccca 315
Query: 116 gctaagttgtccgttgagctagcttaacaaataatatttttaaatcagagaagcccccat 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctaagttgtccgttgagctagcttaacaaataatatttttaaatcagagaagcccccat 375
Query: 176 aatttcccttacaagcaagggaaatcttaagtctaactcttgaagtgcgaaaagcatcgg 235
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatttcccttacaagcaagagaaatcttaagtctaactcttgaagtgcgaaaagcatcgg 435
Query: 236 gaaatatggagggaattgatttccattagaaaaagccccttagaaaccacagaacatgaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaaatatggagggaattgatttccattagaaaaagccccttagaaaccacagaacatgaa 495
Query: 296 gccctgcatatagatgtgttcccggtctttggggaggagggaagatttcggtagctctct 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gccctgcatatagatgtgttcccggtctttggggaggagggaagatttcggtagctctct 555
Query: 356 gtattcctgcataaaaaccttaacttaagggga 388
| |||||||||||||||||||||||||||||||
Sbjct: 556 gcattcctgcataaaaaccttaacttaagggga 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
