Query= MSMg01no373_e06.b1 MSMg01no373_e06.b1 CHROMAT_FILE:
MSMg01no373_e06.b1 PHD_FILE: MSMg01no373_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:12 2005
(576 letters)
>mm_chr19_42127820_42128796
Length = 977
Score = 1064 bits (550), Expect = 0.0
Identities = 568/574 (98%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 4 tgagttccaagacagactgagccacacagtttcaaaaacaaaatcgtgagtggtaaccgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tgagttccaagacagactgagccacacagtttcaaaaacaaaatcgtgagtggtaaccgt 718
Query: 64 aagtagtcttaatattggcagcatctatagtagccacagtcacaagtcaagcaatggcga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aagtagtcttaatattggcagcatctatagtagccacagtcacaagtcaagcaatggcga 658
Query: 124 catgacccagctatgtctcatacagctttccagctgtggacacatggatctctgtggacc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 catgacccagctatgtctcatacagctttccagctgtggacacatggatctctgtggact 598
Query: 184 ctggaaacttgagatggcaccaagaggatggggcctaaagtccca-ctgtctgaaagcct 242
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 597 ctagaaacttgagatggcaccaagaggatggggcctaaagtcccacctgtctgaaagcct 538
Query: 243 gtccctgattcctcttcccaagcatctggctatatcctacttcttggcaacagtaggcag 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtccctggttcctcttcccaagcatctggctatatcctacttcttggcaacagtaggcag 478
Query: 303 attggattgaggtctctggcagtaccctaacccagaccaggggaggctgttctgatgcta 362
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 attggattggggtctctggcagtaccctaacccagaccaggggaggctgttctgatgcta 418
Query: 363 agtctgatgcaatggaaagggccccagacaaggcccacttgcagcactgctggggacaca 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 417 agtctgatgcaatggaaagggccccagacaaggcccacttgcagcactgctggggacata 358
Query: 423 ccctctcttccaaccctgcccagatgtcagttgactacagagcccctggacacagagtga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccctctcttccaaccctgcccagatgtcagttgactacagagcccctggacacagagtga 298
Query: 483 gggtgtgcagggctttattggctccattcaggcatgtggagtcagtgtggggcttgtggt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gggtgtgcagggctttattggctccattcaggcatgtggagtcagtgtggggcttgtggt 238
Query: 543 tgctcctgtaatctgcctcctgtcttctctcgtg 576
||||||||||||||||||||||||||||||||||
Sbjct: 237 tgctcctgtaatctgcctcctgtcttctctcgtg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 977
Length adjustment: 10
Effective length of query: 566
Effective length of database: 967
Effective search space: 547322
Effective search space used: 547322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_e06.g1 MSMg01no373_e06.g1 CHROMAT_FILE:
MSMg01no373_e06.g1 PHD_FILE: MSMg01no373_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:12 2005
(447 letters)
>mm_chr12_55232374_55233220
Length = 847
Score = 826 bits (427), Expect = 0.0
Identities = 442/447 (98%)
Strand = Plus / Minus
Query: 1 cttgagtcatgtttgtagttttacttattctgttttcagcaccagatttcctatttggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 cttgagtcatgtttgtagttttacttattctgttttcagcaccagatttcctatttggct 588
Query: 61 catctttgtagtctatgtctctgttgatagtctcattttgtttctgtgtcacttggttta 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 587 catctttgtagtctatgtctctgttgatagtctcattttgtttctgcgtcacttgattta 528
Query: 121 gttgtgtgtgttcaggacatgaggtggaatgaaggtcctgcagtagatcactccctgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gttgtgtgtgttcaggacatgaggtggaatgaaggtcctgcagtagatcactccctgggt 468
Query: 181 ggaaagaaacatgtgctggggaccagactgccaaagctaactctggaggggcagaaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggaaagaaacatgtgctggggaccagactgccaaagctaactctggaggggcagaaggag 408
Query: 241 gagtattatgacagaaaagaaaggatttcatgagagttagcagggtggggtctttgagct 300
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gagtaacaggacagaaaagaaaggatttcatgagagttagcagggtggggtctttgagct 348
Query: 301 gattcaggctattccaactgaaggggaactagaaatcttgccctagatagttgacctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gattcaggctattccaactgaaggggaactagaaatcttgccctagatagttgacctttg 288
Query: 361 gggggcagattaagagagattcctgataaatagaagcctgcctcctgagacctgcttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gggggcagattaagagagattcctgataaatagaagcctgcctcctgagacctgcttttc 228
Query: 421 tggtaaaaagaaatctgactttatgct 447
|||||||||||||||||||||||||||
Sbjct: 227 tggtaaaaagaaatctgactttatgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
