TTTTTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAACAAGTATCTTAAGATTGTTAGCCTGCAAGCCCTAGA
AAACTTCTAACTCTGCCTCTAGCACTGTGACTACATGTCACATGTCTGGC
TTTTTTTACATAGCTTTTGGGATTCAACTTAAGTTCATGCTTGTCAGGCA
AATGCTTTACCAACTGCTCTATTTCCCAAAGCCCTGTATCATGTCTTACA
CCTAGCTATATAGTTCATTGTTAAGTGATTTATTTAAAATGAATATATGA
ACGTTTTAAAATAAAGATTACTCTTCCAAATTTGCTTTAGAATATACATG
TCTTAAGGTTGGCCTATTCAAAAATTAACATAATAGACTTCTCCACCTGC
TCTCACCAGACCTGCTGAGCTAGAAGCATAGAGGTTAGATTTCCTCTCTT
CCCCCATTCCTCTGCCTGCCAAGAAAGCATGCCCAGCTGCCCAGAGCATA
GTCCGGTTCCCTGGAGCTGAATTGTTCTGCCACCACTCTGCCTTTCCCAA
TCCCCTACCTGATGTGTTTCCAGAAATCCACCCAACTGCTCGGGGACTTG
CCTTGCCTCTTGAGTTCCCCTGTTCATCCCCAGGATACCTAACAGGGGGC
CACTGTCCCCGGAAAATCCAGGGTAGGCCCCCCCCCCCAATTCTGTTACC
TCTGAAAATTCGGAAAAAAACCTACCTTGCTTATGTGCCCCCCAAAATAA
ACAAACAAAA

NNTTTCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAAGGGGCATTTCAAATG
GCTAGGAAACATTTAAAAAATGTTCAACATCCTTAGCTATATGGGAAGTG
TGACACTTAAACTAGCTTTAGATTCCACCTTACATCTATCTGAATGACAA
GGATCAACATCACCAGCGACAGCTCATGCTGGCACTCCTCTATTGTTGGT
GGAAGTGGAAATTTGTGCAGCTCCTATGGAAATCAATATGGCAGTTCCTC
AGAAAAGTGGAACCTCTATCAGTCTACCTCAATACACAGATAAACTATTC
TTGGGTATATTTCCAAAGATGCTCCATTCTATAAGTGGGACACTTGCTTT
ATCATGTTCAATCATTTATTCATAATAGGGAGTAACTGGAAACAACTTTG
ATATCCCTCAACAGAAGAATGAATAAGCAAAATGTGACTCATTCAAACAA
TGTATTCCTTAGCTGTTAAAAAAAATACATCCTGAAACTGATAGACAAAT
GAATGGAACTGGAAAAAACAATCATCCTGAGGGAAGGAACCCCAACATAG
AAAGGCCAATATGGGATATATTTCTTCTACACGGAATTATCTAGCTCTGT
ATCAAATCCCCAAGGAAAATCTTGGAGCCCCCAGAAAATTTTTTTCACCG
CCGCATTTCATCTCTTTTGTGATGTTCCCCCTTTCTCCTCTCTCTTATTT
ATTCTTTCTC

Query= MSMg01no375_e10.b1 MSMg01no375_e10.b1 CHROMAT_FILE:
MSMg01no375_e10.b1 PHD_FILE: MSMg01no375_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:49 2005
         (441 letters)



>mm_chr19_49227325_49228165
          Length = 841

 Score =  824 bits (426), Expect = 0.0
 Identities = 435/438 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaacaagtatcttaagattgttagcctgcaagccctagaaaacttctaactctg 63
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacaagtaggttaagattgttagcctgcaagccctagaaaacttctaactctg 263

                                                                       
Query: 64  cctctagcactgtgactacatgtcacatgtctggctttttttacatagcttttgggattc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctctagcactgtgactacatgtcacatgtctggctttttttacatagcttttgggattc 323

                                                                       
Query: 124 aacttaagttcatgcttgtcaggcaaatgctttaccaactgctctatttcccaaagccct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacttaagttcatgcttgtcaggcaaatgctttaccaactgctctatttcccaaagccct 383

                                                                       
Query: 184 gtatcatgtcttacacctagctatatagttcattgttaagtgatttatttaaaatgaata 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtatcatgtcttacacctagctatatagttcattgttaagtgatttatttaaaatgaata 443

                                                                       
Query: 244 tatgaacgttttaaaataaagattactcttccaaatttgctttagaatatacatgtctta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgaacgttttaaaataaagattactcttccaaatttgctttagaatatacatgtctta 503

                                                                       
Query: 304 aggttggcctattcaaaaattaacataatagacttctccacctgctctcaccagacctgc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggttggcctattcaaaaattaacataatagacttctccacctgctctcaccagacctgc 563

                                                                       
Query: 364 tgagctagaagcatagaggttagatttcctctcttcccccattcctctgcctgccaagaa 423
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 tgagctagaagcatagaggttagatttcctctcttcacccattcctctgcctgccaagaa 623

                             
Query: 424 agcatgcccagctgccca 441
           ||||||||||||||||||
Sbjct: 624 agcatgcccagctgccca 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)