NNNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAGAAAGTATCTTATCCTTCTCATTAAATAGAATTTGTCAA
CTTTATAAAGAAACTCCTGCACAATAAGGGCAATTGCATTATCGTTGTTA
AACTAGCAAGTATTTACTAAATATTACATTAGGGTGGGCATTCTGCAAGA
GCCCCGAGAATAGACAACCCATAATAGTGGTGCCTATTCTGCTGTGGCTT
CAGAAGGAAGCTCTGAAGAGTGTAAATTGACACATAATGTTTCAAGAACC
TGAAAAATGGTGATGAGATGGACTATTGGAACATACTTCACTACAGAGGA
ATTCTCAGGGAACAGGTATTAAATAGTCAAGGAAAAACTGAAATTACTCT
TCAAGGAGCTGTAGAGGGGACAGAAAGAACTTCCTCACCTCCTCAAAAAA
TTTCCTTCCATTCCGCTATTTTATAACATGAACAATAGTCCTGCAATGTA
TAGAATATACACAAATTCAAAAGCCAATGAATTCTTTCAGTGGGATAATT
TAGCTTAGGTGAAGCATAGAGTTTTCCATCCAGATACTCAATTTGGAGAG
AGATGACTATTCAGAACAGGAATGTATAGCAGAGATCAGTGATGATAATT
CATGTAGTGTTGAACAGGGAGTGCTCATTCACGGAATCCTGCAAAGCAAT
CTANGAAAGTGGGAGATTGTTGAGTATAGCCACATTCTATTGGTTCTTTA
CCACTN

NNNNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTACTGTTGTGGGAAAT
ATTAAAAAAATGTACCATCCTGCGCTATACCAAACTACTCTCAGGCCTTG
GTGACCCTGCTGCATCCATGGCTAGCCCCATGCAGTGACCGATCCTGGTT
CTCTTGTGGCAGATTCTGCTCACAATCCCAGCCATCCACCCCCTTTGGTC
AGCAGTCCCAAATCCCAGTAACTAGGTAAAATCAAAACTCTAGAGGCTTG
TAATTTATAAGTCAGATTTATATCTCACCCCACAAAACATCCACATAATT
TACTCAGAGCCAATTGATATTGATATAAATTGCCCACCTAGATAAGACAA
ATTGTCCTGTAATTATCTGTTCCTTATATGATATTCATAGCTACCTGTGA
CTATTTGGACAATGTGGAGTCTGGATCATCTTTCTCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTACTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCTCTCCTTCCTTCTCTCCTTCCTTCCTTCCTTCCTTTCCTTCCTTCCT
TCCTTTCTTCCTTTCCTTCCTTCCTCCCTTCTCTCCTTCTTTCCTTACTT
TCTCCTTCCTTTTCCCCCTTCTTTCCTTCTTTTCTTCNTTCCTTCCCCCT
TCCCTCCCTCCTTTCCTCCTTTTTCCCCCCCTCTCCCCCTGCCCTTTTTC
CCCTCTTCCCCCCCCC

Query= MSMg01no378_c15.b1 MSMg01no378_c15.b1 CHROMAT_FILE:
MSMg01no378_c15.b1 PHD_FILE: MSMg01no378_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:35 2005
         (575 letters)



>mm_chr19_26135462_26136437
          Length = 976

 Score =  975 bits (504), Expect = 0.0
 Identities = 555/572 (97%), Gaps = 1/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccagaaagtatcttatccttctcattaaatagaatttgtcaactttataaagaaa 64
           |||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 776 gaattccaaaaaggattttatccttctcattaactagaatttgtcaactttataaagaaa 717

                                                                       
Query: 65  ctcctgcacaataagggcaattgcattatcgttgttaaactagcaagtatttactaaata 124
           |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 716 ctcctgcacagtatgggcaattgcattatcattgttaaactagcaagtatttactaaata 657

                                                                       
Query: 125 ttacattagggtgggcattctgcaagagccccgagaatagacaacccataatagtggtgc 184
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 656 ttacattagggtgggcattctgcaagagccctgagaatagacaacccataatagtggtgc 597

                                                                       
Query: 185 ctattctgctgtggcttcagaaggaagctctgaagagtgtaaattgacacataatgtttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 596 ctattctgctgtggcttcagaaggaagctctgaagagtgtaaattgacacacagtgtttc 537

                                                                       
Query: 245 aagaacctgaaaaatggtgatgagatggactattggaacatacttcactacagaggaatt 304
           |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 536 aagaacctgaaaaatggtgaggaaatggactattggaacatacttcactacagaggaatt 477

                                                                       
Query: 305 ctcagggaacaggtattaaatagtcaaggaaaaactgaaattactcttcaaggagctgta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctcagggaacaggtattaaatagtcaaggaaaaactgaaattactcttcaaggagctgta 417

                                                                       
Query: 365 gaggggacagaaagaacttcctcacctcctcaaaaaa-tttccttccattccgctatttt 423
           ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 416 gaggggacagaaagaacttcctcacctcctcaaaaaaatttccttccattccactatttt 357

                                                                       
Query: 424 ataacatgaacaatagtcctgcaatgtatagaatatacacaaattcaaaagccaatgaat 483
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 356 ataacatgaacaatagtcctgcaatgtatagaatataaacaaattcaaaagcccatgaat 297

                                                                       
Query: 484 tctttcagtgggataatttagcttaggtgaagcatagagttttccatccagatactcaat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 296 tctttcagtgggataatttagcttaggtgaagcatagagttttccatccagatactctat 237

                                           
Query: 544 ttggagagagatgactattcagaacaggaatg 575
           ||||||||||||||||||||||||||||||||
Sbjct: 236 ttggagagagatgactattcagaacaggaatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 976
Length adjustment: 10
Effective length of query: 565
Effective length of database: 966
Effective search space:   545790
Effective search space used:   545790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)