Query= MSMg01no382_a12.b1 MSMg01no382_a12.b1 CHROMAT_FILE:
MSMg01no382_a12.b1 PHD_FILE: MSMg01no382_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:38 2005
(476 letters)
>mm_chr19_25749034_25749912
Length = 879
Score = 808 bits (418), Expect = 0.0
Identities = 458/472 (97%), Gaps = 5/472 (1%)
Strand = Plus / Plus
Query: 5 gaattctttgttatctttattcctgtgattgtttgattgatttccctggccgaggtggcc 64
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattctttgttatcgttattcctgtgattgtttgattgttttccctggccgaggtggcc 264
Query: 65 tttaggcaagtgctctgcaattgatcttctacccgggttccccgggaaaactttcgattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaggcaagtgctctgcaattgatcttctacccgggttccccgggaaaactttcgattt 324
Query: 125 gacttcccctgcagataggtgctgggaggtagttaggtcaccgaatatagtgggtgactc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacttcccctgcagataggtgctgggaggtagttaggtcaccgaatatagtgggtgactc 384
Query: 185 caaaagggaaactgctcaaactcaccggacgg-cttgggga-cctcaggtggccctggct 242
|||| ||||| ||||||||||||||| ||||| |||||||| |||||| |||||||||||
Sbjct: 385 caaa-gggaacctgctcaaactcaccagacgggcttggggaacctcagatggccctggct 443
Query: 243 ctgggttcaacctctttcctagatgggctagttgggagtaacctggcagtgatcagagga 302
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 ctgggttcaacctctttcctagatgggctagttgggagtaacctggcagtgaccagagga 503
Query: 303 ctcccaggctggtgtcccttaagagttttttt--ctgccttcacgtataccacctcctcc 360
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 ctcccaggctggtgtcccttaagagtttttttttctgccttcacgtataccacctcctcc 563
Query: 361 agagaactagataaatatagaagacccccctcaaactctggcaccccatcgtgtctactc 420
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 agagaactagataaatacagaagacccccctcaaactctggcaccccatagtgtctactc 623
Query: 421 cacctaggggagaaaccaccctgtgttttttttttttttttttttttttttt 472
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 624 cacctaggggagaaaccaccctgtattttttttttttttttttttttttttt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 879
Length adjustment: 10
Effective length of query: 466
Effective length of database: 869
Effective search space: 404954
Effective search space used: 404954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_a12.g1 MSMg01no382_a12.g1 CHROMAT_FILE:
MSMg01no382_a12.g1 PHD_FILE: MSMg01no382_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:38 2005
(503 letters)
>mm_chr19_25920921_25921823
Length = 903
Score = 779 bits (403), Expect = 0.0
Identities = 424/431 (98%), Gaps = 2/431 (0%)
Strand = Plus / Minus
Query: 1 tttctatattggagaacaagtgtgtcttgcacagttggaagcagaaaccgaactgacaaa 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 723 tttctatattagagaacaagtgtgtcttgcacagttggaagcagaaaccgaactgataaa 664
Query: 61 aaaaaattctttttattttatttttttactatattagctgcggttacaacttcaaaccct 120
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 663 aaaaaaatctttttattttatttttttactacattagctgcggttacaacttcaaaccct 604
Query: 121 ggtagggtttcaatcacactgagatacatgcaatttatgacaaaataaaataacactaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ggtagggtttcaatcacactgagatacatgcaatttatgacaaaataaaataacactaag 544
Query: 181 acacttgaaatataagaatattcttaatttaccatttttgcaatactgtaaaaatatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 acacttgaaatataagaatattcttaatttaccatttttgcaatactgtaaaaatatacc 484
Query: 241 tttgtgcttaagtgaacatatcaggttttaaaagttattttcttcacaaccctaatagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tttgtgcttaagtgaacatatcaggttttaaaagttattttcttcacaaccctaatagag 424
Query: 301 attcaggcatagaggctgggattgacttttctgtgaaattctagggaactt-aggtttct 359
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 423 attcaggcatagaggctgggattgacttttctgtgaaattctagggaacttga-gtttct 365
Query: 360 gtccagcagtcagctgtggggacattttgctgagcacactacatttccctctccctcctg 419
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtccagcagtcagctatggggacattttgctgagcacactacatttccctctccctcctg 305
Query: 420 cccctaaattc 430
|||||||||||
Sbjct: 304 cccctaaattc 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
