Query= MSMg01no382_l22.b1 MSMg01no382_l22.b1 CHROMAT_FILE:
MSMg01no382_l22.b1 PHD_FILE: MSMg01no382_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:35 2005
(484 letters)
>mm_chr19_21164708_21165591
Length = 884
Score = 920 bits (476), Expect = 0.0
Identities = 479/480 (99%)
Strand = Plus / Plus
Query: 5 gaattctaatatcaaatagctaatgcatttagagcaataaattcttcacccagcagttgt 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaatatcaaatagctaatgaatttagagcaataaattcttcacccagcagttgt 264
Query: 65 gttatctggctagttttaaaatattaaggctgtctggtgttttccagctccagcggctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttatctggctagttttaaaatattaaggctgtctggtgttttccagctccagcggctca 324
Query: 125 ggtgggcaggagaaagggcacagccataaggacagtcattagatgtttggcggaactagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtgggcaggagaaagggcacagccataaggacagtcattagatgtttggcggaactagc 384
Query: 185 catgaggggttggaagagtggtcacagctcccaggagtcagagaaccagctagccgttgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catgaggggttggaagagtggtcacagctcccaggagtcagagaaccagctagccgttgg 444
Query: 245 cagagctatgtcgggagtgggaccaggagcagcttgttctcagagccaagctgagagctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagagctatgtcgggagtgggaccaggagcagcttgttctcagagccaagctgagagctc 504
Query: 305 agccttgagaaggtgatgttgtggcttttaaaatcaccctcaacatacccggcctccaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agccttgagaaggtgatgttgtggcttttaaaatcaccctcaacatacccggcctccaga 564
Query: 365 atgataagatgtaactgttgtataagtccacactagtggtactctgctgaagcagctcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atgataagatgtaactgttgtataagtccacactagtggtactctgctgaagcagctcaa 624
Query: 425 acgaacaaatacattgtttctagattcagcttatagggtatgagcaacttgaattctctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acgaacaaatacattgtttctagattcagcttatagggtatgagcaacttgaattctctt 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_l22.g1 MSMg01no382_l22.g1 CHROMAT_FILE:
MSMg01no382_l22.g1 PHD_FILE: MSMg01no382_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:35 2005
(460 letters)
>mm_chr19_21174944_21175807
Length = 864
Score = 783 bits (405), Expect = 0.0
Identities = 449/465 (96%), Gaps = 6/465 (1%)
Strand = Plus / Minus
Query: 1 tttatgggttgcgaggtgcatttagtcatctcggtctaagaagtacagctgtgactgttg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 664 tttatgggttgcgaggtgcatttagtcatctcgatctaagaagtacagctgtgactgttg 605
Query: 61 agcctctgta-aagtgattcctaaaagtcgcatagggtggcaggtggagctgtggttgcc 119
|||||||||| | | |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 604 agcctctgtagatg-gattcctaaaagtcccatagagtggcaggtggagctgtggttgcc 546
Query: 120 tacatctgatacttcttctttgacctgaaaggaacattttttt-ttctta---ttacatt 175
||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 545 tacatctgatacttcttctttgacctgaaaggaacatttttttattattattgttacatt 486
Query: 176 gtgaaagataaactggagataaaatgtagtattttctaaatctcaaaataacacccagct 235
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 485 gtgaaagataaactggagataaaatgtaatattttctaaatctcaaaataacgcccagct 426
Query: 236 atatctgatcattattgacataccccattatctagttttctcctcattctgatgaaaatt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atatctgatcattattgacataccccattatctagttttctcctcattctgatgaaaatt 366
Query: 296 atgcaagaaattttcaatgtattttctaagtctgttatgttttcttttgtgtttttcatt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atgcaagaaattttcaatgtattttctaagtctgttatgttttcttttgtgtttttcatt 306
Query: 356 ttgctgtctttatatctccgtgtagaatattacttgtggcccacttcccagttgtgcgga 415
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||
Sbjct: 305 ttgctgtctttatatctccatgtagaatattacttgtggcccactttccagttgtgcaga 246
Query: 416 ttcatttgactgcagtgtctagtacgttgttaagtttgttaactg 460
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttcatttgactgcagtgtctagtacgttgttaagtttgttaactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 864
Length adjustment: 10
Effective length of query: 450
Effective length of database: 854
Effective search space: 384300
Effective search space used: 384300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
