Query= MSMg01no383_a24.b1 MSMg01no383_a24.b1 CHROMAT_FILE:
MSMg01no383_a24.b1 PHD_FILE: MSMg01no383_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:00 2005
(462 letters)
>mm_chr19_6360041_6360902
Length = 862
Score = 841 bits (435), Expect = 0.0
Identities = 454/461 (98%), Gaps = 4/461 (0%)
Strand = Plus / Minus
Query: 4 gaattcatgagatcat-t-tccgggaaaaagtaattataaagttggatttgatgacaagc 61
|||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gaattcatgagatcatctat--gggaaaaagtaattataaagttggatttgatgacaagc 759
Query: 62 cactgttttaattctagcactccacagacagaattcaaggccagcctgatgtatgtaaca 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 cactgttttaattccagcactccacagacagaattcaaggccagcctgatgtatgtaaca 699
Query: 122 agttccaggccagcaagagttacatgatgagaccctacccagtgattgtaagaattccaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agttccaggccagcaagagttacatgatgagaccctacccagtgattgtaagaattccaa 639
Query: 182 aattcaggataacaatgctgtaagtcttacataatattctaatccacccatatctatccc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aattcaggataacaatgctgtaagtcttacataatattctaatccacccatatctatccc 579
Query: 242 tgggtttaggtcaagagacttcatgtaccttctcattggatacagtgtcagatgaaggac 301
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 578 tgggtttaggtcaagagacttcatgtaccttctcattggaaacagtgtcagatgaaggac 519
Query: 302 agtgctgtcttccttttaccatgtgcagcggtgatggctgctgggtttacagtggagcac 361
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 518 agtgctgtcttccttttaccatgtgcagcagtgatggctgctgggtttacagtggagcac 459
Query: 362 caactctgcagcacagcaggaaatgaaacaatcatcctgccgagtcaggacagaatgacg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caactctgcagcacagcaggaaatgaaacaatcatcctgccgagtcaggacagaatgacg 399
Query: 422 ccctggtagggacagaatgacaccttggtagggacagaatg 462
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ccctggtagggacagaatgacaccttggtagggacagaatg 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_a24.g1 MSMg01no383_a24.g1 CHROMAT_FILE:
MSMg01no383_a24.g1 PHD_FILE: MSMg01no383_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:00 2005
(381 letters)
>mm_chr19_6218131_6218911
Length = 781
Score = 690 bits (357), Expect = 0.0
Identities = 372/377 (98%)
Strand = Plus / Plus
Query: 1 aacactttttatgcctggaggccaatgcatcaggaactcagtgctggtaattgttattgg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aacactttttatgcctggaggccaatgcatcaggaactcagtgctgggaattgttattgg 260
Query: 61 acagattagcagggactagacagtgatcggccttaagtccaccaggatctcgggaatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagattagcagggactagacagtgatcggccttaagtccaccaggatctcgggaatgac 320
Query: 121 ctaaaaccttctggagtaaagtgctaaaacaacctcacttctaatcttttgtcacatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaaaccttctggagtaaagtgctaaaacaacctcacttctaatcttttgtcacatggt 380
Query: 181 taaggcatgttgtgtgcctggacacccaacacacatgtaaaacctgactgcttatttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaggcatgttgtgtgcctggacacccaacacacatgtaaaacctgactgcttatttcca 440
Query: 241 ggagtttatcaagcacttgactgtgcccttgggaataaagacttctgcctctgagaacag 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ggagtttatcaagcacttgactgtgcccttgggaatatagacttctgcctctgagaacag 500
Query: 301 ggttagaagatggagttttgtgtcagccccacagcacaccgagtggttttgagccaggag 360
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ggttagaagatggagttttgtgtcagccccacagcacaccgagtatttttgagccaggag 560
Query: 361 ctgtttcctctgcactc 377
||||||||||| |||||
Sbjct: 561 ctgtttcctctacactc 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
