Query= MSMg01no384_d09.b1 MSMg01no384_d09.b1 CHROMAT_FILE:
MSMg01no384_d09.b1 PHD_FILE: MSMg01no384_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:27 2005
(544 letters)
>mm_chr19_48750242_48751185
Length = 944
Score = 1006 bits (520), Expect = 0.0
Identities = 535/540 (99%)
Strand = Plus / Plus
Query: 5 gaattctattagtggttaagtggagaagaggataaaggcttaaaacactgagatttattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctattagtggttaagtggagaagaggataaaggcttaaaacactgagatttattt 264
Query: 65 tgaataactaagtggaataaatgagcaaaggacttgaaaaaggtaattgtacgtcttaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaataactaagtggaataaatgagcaaaggacttgaaaaaggtaattgtacgtcttaag 324
Query: 125 ggttcacatatccctttcccttctgtaaggagtaagaaactatgctgagccatgtgatag 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ggttcacatatccctttcccttctgtagggagtaagaaactatgctgagccatgtgatag 384
Query: 185 tcagctgataggtttctaccattgtggccatttgtctttatctataatattcaaattgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagctgataggtttctaccattgtggccatttgtctttatctataatattcaaattgta 444
Query: 245 ttggacccagctcagtctcctaactggaaaagcttcaaaatgtcattttctataagagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggacccagctcagtctcctaactggaaaagcttcaaaatgtcattttctataagagca 504
Query: 305 atagtccttgtataaatcaaacttattcccattgtggtccttcttatgcagagattctga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atagtccttgtataaatcaaacttattcccattgtggtccttcttatgcagagattctga 564
Query: 365 tagcaacacctttcagtcatgggcaacaatggagctttgctttttcagggcctgagaagt 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 tagcaacacctttcagtcatgggcaacaatggagcattgctttttcagggcctgagaagt 624
Query: 425 ggaaagggtctccacacagaaaggtcttcattgttggtggacatcctgtctgcaaaatta 484
|||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 625 ggaaagggactccacaaagaaaggtcttcattgttggtgcacatcctgtctgcaaaatta 684
Query: 485 aaagtagagtgatatgggatctatccctctccacagagaagttggggagtctcactcaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaagtagagtgatatgggatctatccctctccacagagaagttggggagtctcactcaat 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_d09.g1 MSMg01no384_d09.g1 CHROMAT_FILE:
MSMg01no384_d09.g1 PHD_FILE: MSMg01no384_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:27 2005
(523 letters)
>mm_chr19_48905019_48905941
Length = 923
Score = 949 bits (491), Expect = 0.0
Identities = 517/529 (97%), Gaps = 6/529 (1%)
Strand = Plus / Minus
Query: 1 ttgtaaaagagtagttagtgaagtaaactagacaacactattctcaatagaatgtgaaat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 674 ttgtaaaagagtagttagtgaagtaaactagacaacactattctaaatagaatgtgaaat 615
Query: 61 tatctttaactaaaattgctggatcaactatatatatatatatatatatatatat----- 115
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tatctttaactaatattgctggatcaactatatatatatatatatatatatatatatatt 555
Query: 116 -gaaaagggagaagaaaattgactctacttttaagttatactcaaatattaaaataagtc 174
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 554 ggaaaagggagaagaaaattgactctacttttaagttatactcaaattttaaaataagtc 495
Query: 175 atggacttgacactataaaacttctagaacaatataaggatagatatctttgcaacttga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atggacttgacactataaaacttctagaacaatataaggatagatatctttgcaacttga 435
Query: 235 ggtatataatgattgctaagatcacaaagggatggaggatgttgatatgctaccaacaaa 294
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 434 ggtatataaagattgctaagatcacaaagggatggaggatgttgatatgctatcaacaaa 375
Query: 295 tttaacatccctttccctttgaaaagtgtcatggtaacacacagctataaccattctcgg 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttaacatccctttccctttgaaaagtgtcatggtaacacacagctataaccattctcgc 315
Query: 355 gcctctcaagattctatgctccaatgctcaggaggactgcacacatttttactttacaaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcctctcaagattctatgctccaatgctcaggaggactgcacacatttttactttacaaa 255
Query: 415 taaaagaagaccttgaagatttgatttagtctactcctatcctgaatctcaagaaagcag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taaaagaagaccttgaagatttgatttagtctactcctatcctgaatctcaagaaagcag 195
Query: 475 attgtcttgagtgatatgagtaggcccaatataaacacatgaactctta 523
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 attgtcttgagtgatatgagtaggcccaatataaacacatgaactctta 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
