XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACCTGA
GGAATACTGAATGGAAAACAAGCACCTGAAAAAAATATGTTCAGCATCCT
TAATCATCAGGGAAATTCAAATCAAAACAACCCTGAAATTACACCTCACA
CCAGTCAGAATGCCTAAGATCAAATATTCAGGTGGCAGCAGATGCTGGTG
AGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTGGGATTGCAAGC
TTGTACAACCACTCTGGAAATCAGTCTGGCAATTCCTCAGAAAACTGGAC
ATAGTACTACCGGAGGATACCCCAATTCCTCTCCTGGTCATATATCCTGA
AGATGTCCCAACTGGTAAGAAGGACACTTGCTCCACTATGTTCATTGCAG
CCTTATTTATAATAGCCAGGAGCTGGAAAGAACCCAGATGCCCCTCTACA
GAGGAATGGATATAGAAAATGTGGCACATTTACACATTGGAGTACTACTC
AGCTATTAAAAAGAATGAATTTATGAAATTCCTAGTATTTTTACTCCTTA
AGAATTCTTTTAATACTCTTGATCTGTTATGGTATCATATGATGTCCTCT
CTGTAAATATGGTATCAGAAGTTCGACATATAGTACTAACTGTATAAATT
AAATTTAGTAGTATGGGGATTTTGTACCTTGACTTCTGTATTGTGTCATC
TTCTCATCTGAGTAACCTGCAATTGAAGTGAAGGTTTCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTCACCTGAGGAATACTGAATGGCTGAGAAACACCTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACTCCAGTCAGAATGGCTAAAATAAAAAATTCAGGTGA
CAGGAGATGCTGGTGAGGATTTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATTAGTCTGGCAGTTC
CTCAGAAAACTGGACATAGCACTACCGGCAGATCCGGCAATGCTTCTCCT
GGGCATCTACCCAGAAGAAGTTCCAACTGGTAATAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATATCCAAAAGGTGGAAAGTACCG
AGAGTTCCCTTAACAGAGGAATGGATACAGAAAATGTTGTACATTTACAA
AATGGAGTACTACTTAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
GCAAATGGATGGACCTGGAGGGCATCATCCTGACTGAGGTTACCCAATCA
CTAAAGAACTCACATGATATGTACTCACCGATAAGTGGATTTTACCCCAC
AATCTTAAAATACCCTAGATACAAGATGCAATTTGTAAAAAACTTTAACT
TTAATAATAAAGAAAACCGAGTGTGGGTACTTTGTCCCCTTG

Query= MSMg01no385_c16.b1 MSMg01no385_c16.b1 CHROMAT_FILE:
MSMg01no385_c16.b1 PHD_FILE: MSMg01no385_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:39 2005
         (621 letters)



>mm_chr19_39912546_39913566
          Length = 1021

 Score = 1019 bits (527), Expect = 0.0
 Identities = 596/619 (96%), Gaps = 5/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcacctgaggaatactgaatggaaaacaagcacctgaaaaaaatatgttcagca 64
           ||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 206 gaattctcaccagaggaatactgaatggataagaagcacctgaaaaaaa-atgttcagca 264

                                                                       
Query: 65  tccttaatcatcagggaaattcaaatcaaaacaaccctgaaattacacctcacaccagtc 124
           |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 265 tccttaatcatcagggaaattcaaatcaaaacaaccctgagattccacctcacaccagtc 324

                                                                       
Query: 125 agaatgcctaagatcaaatattcaggtggcagcagatgctggtgaggatgtggagaaaga 184
           |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||
Sbjct: 325 agaatgcctaagatcaaaaattcaggtggcagcagatgctggtgaggatgtaaagaaaga 384

                                                                       
Query: 185 ggaacacttctccattgttggtgggattgcaagcttgtacaaccactctggaaatcagtc 244
           ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 385 ggaacacttctccattgttggtgggattggaaggttgtacaaccactctggaaatcagtc 444

                                                                       
Query: 245 tggcaattcctcagaaaactggacatagtactaccggaggataccc-caattcctctcct 303
           ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 445 tggcagttcctcagaaaactggacatagtactaccggaggat-cccgcaattcctctcct 503

                                                                       
Query: 304 ggtcatatatcctgaagatgtcccaactggtaagaaggacacttgctccactatgttcat 363
           || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 504 gggcatatatcctgaagatgtcccaactggtaaaaaggacacatgctccactatgttcat 563

                                                                       
Query: 364 tgcagccttatttataatagccaggagctggaaagaacccagatgcccctctacagagga 423
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct: 564 tgcagccttatttataatagacagaagctggaaagaacccagatgcccctctacatagga 623

                                                                       
Query: 424 atggatatagaaaatgtggcacatttacacattggagtactactcagctattaaaaagaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atggatatagaaaatgtggcacatttacacattggagtactactcagctattaaaaagaa 683

                                                                       
Query: 484 tgaatttatgaaattcctagtatttttactccttaagaattcttttaatactctt-gatc 542
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 684 tgaatttatgaaattcctagtatttttactccttaagaattcttttactactcttcg-tc 742

                                                                       
Query: 543 tgttatggtatcatatgatgtcctctctgtaaatatggtatcagaagttcgacatatagt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgttatggtatcatatgatgtcctctctgtaaatatggtatcagaagttcgacatatagt 802

                              
Query: 603 actaactgtataaattaaa 621
           |||||||||||||||||||
Sbjct: 803 actaactgtataaattaaa 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)