Query= MSMg01no391_g17.b1 MSMg01no391_g17.b1 CHROMAT_FILE:
MSMg01no391_g17.b1 PHD_FILE: MSMg01no391_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:37 2005
(449 letters)
>mm_chr19_22880589_22881437
Length = 849
Score = 760 bits (393), Expect = 0.0
Identities = 435/449 (96%)
Strand = Plus / Plus
Query: 1 aaaagtaaaacacaacttagaccttcttcacttttaccacaaaaatgtcttaatctccct 60
||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 201 aaaagtaaaacacaacttagaccttcttcacttttaccacaaaaatgccttactgtcccc 260
Query: 61 acaaggagttatatccagtatttatttttgtttgtttgtttatgattttttaacttctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaggagttatatccagtatttatttttgtttgtttgtttatgattttttaacttctag 320
Query: 121 tagctttaatttctctgaaaccctgggaagcaagcaattttggcctaatgtatagagtat 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagctttaatttctctgaaactctgggaagcaagcaattttggcctaatgtatagagtat 380
Query: 181 tttgtggatgtatactatttaatttattcataagtaaatacaatagtgtgaacctgataa 240
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 381 tttgtggatgtatactatttaatttattcataagcaaacacaatagtgtgaacctgataa 440
Query: 241 atcagcatatatggctgattcaaggcattcagtacaacctctgtatgtccgtacagcata 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcagcatacatggctgattcaaggcattcagtacaacctctgtatgtccgtacagcata 500
Query: 301 gcactgagcactagtggtctatattttcttatatggtggcatatgcaccttttcccacat 360
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||
Sbjct: 501 gcactgagcactagtggtctatattttcttatatggcggcatacgtaccttttcccacat 560
Query: 361 atgcccttcataaaaaaagcaactaggtcttccttgactgtcatatcatggcccaaggag 420
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 atgcccttcataaaaaaggcaactaggtcttccttgactgtcatatcctggcccaaggag 620
Query: 421 aagcggttacccatttaaaaaaataaata 449
||||||||||||||| |||||||||||||
Sbjct: 621 aagcggttacccattaaaaaaaataaata 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_g17.g1 MSMg01no391_g17.g1 CHROMAT_FILE:
MSMg01no391_g17.g1 PHD_FILE: MSMg01no391_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:38 2005
(244 letters)
>mm_chr19_23089104_23089747
Length = 644
Score = 402 bits (208), Expect = e-117
Identities = 230/244 (94%), Gaps = 11/244 (4%)
Strand = Plus / Minus
Query: 1 tgggaagggatagcccaagggatattctttgccaccaagtgtttgcacaatttacagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgggaagggatagcccaagggatattctttgccaccaagtgtttgcacaatttacagttt 253
Query: 61 ttactttctaatcttcctgatactctatcagttgactgatttatttgtgtccaagtactg 120
|||||||||||||||||||||| ||||||||||||||||||| |||| ||
Sbjct: 252 ttactttctaatcttcctgatattctatcagttgactgatttctttg-----------tg 204
Query: 121 tccctaagatagccccacaccccctttcttaagtgtatttgaaagaagcactgaaaagtc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 203 tccctaagatagccccacaccccctttcttaagtgtatttgagagaagcactgaaaagtc 144
Query: 181 tttctgagactgttgatgtaactcagtgatttattgattatatgtaagtacactgtagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tttctgagactgttgatgtaactcagtgatttattgattatatgtaagtacactgtagct 84
Query: 241 gcgt 244
||||
Sbjct: 83 gcgt 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
