Query= MSMg01no391_o12.b1 MSMg01no391_o12.b1 CHROMAT_FILE:
MSMg01no391_o12.b1 PHD_FILE: MSMg01no391_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:16 2005
(242 letters)
>mm_chr19_51589668_51590309
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 ttacaaaaatgaaacttttacttggaagtaagattcctttactttgatgatattatatta 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ttacaaaaatgaaacttttacttggaagtaagattcctttactttgctgatattatatta 260
Query: 61 gtgtaggtatagaaatagttagtcttagattcagattaaaacattggctccagctgtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtaggtatagaaatagttagtcttagattcagattaaaacattggctccagctgtcca 320
Query: 121 gctagtaaaactatgaagaagtaactggcttataagggcattaatattgtcaaagaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctagtaaaactatgaagaagtaactggcttataagggcattaatattgtcaaagaaaca 380
Query: 181 gtctattgctaagttcatagcagaaactggctgttatgaagagggtcaaaaagaaggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctattgctaagttcatagcagaaactggctgttatgaagagggtcaaaaagaaggtca 440
Query: 241 ca 242
||
Sbjct: 441 ca 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no391_o12.g1 MSMg01no391_o12.g1 CHROMAT_FILE:
MSMg01no391_o12.g1 PHD_FILE: MSMg01no391_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:16 2005
(242 letters)
>mm_chr19_51723216_51723857
Length = 642
Score = 387 bits (200), Expect = e-112
Identities = 230/244 (94%), Gaps = 8/244 (3%)
Strand = Plus / Minus
Query: 1 tattgaggagtcatttggcaccaggttatcactctgcaacttggatagattcattgacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tattgaggagtcatttggcaccaggttatcactctgcaacttggatagattcattgacac 381
Query: 61 gaaaatccagaaggtagatgtttataacttacaggttcaccagataatgatgctgagatt 120
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 380 aaaaatccagaaggtagatgtttataacttccaatttcaccagataatgatgctgagatt 321
Query: 121 tcagtaataggcatgctcatagcagatctagatacagaatggcgttccaaattttttg-- 178
||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 320 tcagtaataggcatgctcatagcagatctagatacagaatgacgttccaaact----gaa 265
Query: 179 --tattgccaaataatttatttgaatcagtagtgttgatttcaatgccttcatctaagac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtattgccaaataatttatttgaatcagtagtgttgatttcaatgccttcatctaagac 205
Query: 237 atat 240
||||
Sbjct: 204 atat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
