Query= MSMg01no391_o22.b1 MSMg01no391_o22.b1 CHROMAT_FILE:
MSMg01no391_o22.b1 PHD_FILE: MSMg01no391_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:18 2005
(244 letters)
>mm_chr19_55303410_55304053
Length = 644
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 1 acaaggtcctgatgtccacatgagcttctgggagtcacactttataggcaagtggtttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaggtcctgatgtccacatgagcttctgggagtcacactttataggcaagtggtttta 260
Query: 61 ctgaatgtggacttgggccgaaggtgacgctgtcattcactgccttggggagctcagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaatgtggacttgggccgaaggtgacgctgtcattcactgccttggggagctcagagc 320
Query: 121 ttcttctgggccccattggagatgggatccagctggggcatcaaaggagg-taaagcccc 179
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 321 ttcttctgggccccattggagatgggatccagctggggcatcaaag-agggtaaagcccc 379
Query: 180 tctgaaggtgtacttgggatgctgtgctcctgggcgccctcctcccccagggaccctgaa 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctggaggtgtacttgggatgctgtgctcctgggcgccctcctcccccagggaccctgaa 439
Query: 240 aa 241
||
Sbjct: 440 aa 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no391_o22.g1 MSMg01no391_o22.g1 CHROMAT_FILE:
MSMg01no391_o22.g1 PHD_FILE: MSMg01no391_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:18 2005
(135 letters)
>mm_chr19_55506352_55506886
Length = 535
Score = 252 bits (130), Expect = 9e-72
Identities = 133/134 (99%)
Strand = Plus / Minus
Query: 1 cacaaaatgagagtagtggtagcatctaacccacagacactgaacaagaagcatgcagta 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cacaaaataagagtagtggtagcatctaacccacagacactgaacaagaagcatgcagta 275
Query: 61 taatttacttaggaatatttatagggttgccatctatttgccagccttccatgtgatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taatttacttaggaatatttatagggttgccatctatttgccagccttccatgtgatggt 215
Query: 121 ggtggtggtggtgg 134
||||||||||||||
Sbjct: 214 ggtggtggtggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 535
Length adjustment: 8
Effective length of query: 127
Effective length of database: 527
Effective search space: 66929
Effective search space used: 66929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
