XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAG
CAACTTTTAATAGCATGGATGCAGATGGTCACCCTGGCAATTAGCAAATC
TCCCTGTCCCTGTCCCTGCCCCTGTCCCTGTCCCTGTCCCTCTCCCTCCT
CTCTCTCCCCTTCCTTCCTCCCTCCCTCCCTGCCCCCTTACTCTGGAATC
TATGGTTGAGAGGGGTGTTAAGAGGTCTGTCCAAAGGGACTGGCCAGTAG
CCAGACTATACGGACTCTCTAGAGCCAAGCAAAATGCTTAGGTTTCTCTC
TTTACAAAAATAATGCCAAGTAACAATGAGCATTTTCTTTAGAGAATTCT
GAGCCTAAATTCCACCAATATTTTGTGCCCCACCCCTGACTATGTTCAGC
ACAATCTGATAGGAATCATATACCAGGCCCTTGAAACAGATGTGTTAAAC
TAGCCAAATAAATAAATCAATAGAATGCATTCCCTTCTGCAGCATGTATC
TGCTTTTCTCATCTACCTCTTGATCTGTAATGTATGGACATTGTTATTTG
AATTTGTTTGAAAGAAAAAAATAATCTATTTATACAATATGCCAAAACTA
TTAAATTTATGCTCCAAGGTGCTAGTAGATTTAAGCTTGCGGAAATCCTT
TAGACAGGTAAATCTTCCGGAGATGGGGTGATCTCTAACACCGTCCCCTA
TTCTTTTTTAAAAAAGACAAGGATTGGAAAAAAAAAAGAAAAGAATTTTT
GGCGTTATTTCTCA

AGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCACATTTTCTAAGTACTTTCCTAATATCTAGA
AGCAGGGATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATGTGTGTGTGGGGGGGGGGGGGGGGGAGGGAGAG
AGAGAGCGAGTGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGAGA
GAGAGAGAGAGAGAGAGAGATATAGAGATATATAGACATACAGACACCCC
GCTTCGGCCCTCCCGCGGCAGAGCGCGCGCGCGGCGCGCGCTTCTGCGCC
TGGGGTCGCCCCCCCCCCCCCCCCCGCCTGCCGCCCCCCGCAGGGGGCGC
CGTCGTGCGGGCGCGGCTGGGTGCGCTGGCTCCCTCCCCGGCTGGGGCCG
CGGCCGCGCGTTGGCGGCCCGCTGGGCGTGCCTCGCGTGCCGGGCGCGGC
CGTGCGGTTGGTCCCCGCCCCCTGCTGCGGCCGACGCGGCCCGGCGCTGG
CCCGTCGTGGCCGGCCCGGCCGGAGGCGCCCGCGCGGTTCGTTGCTTCGC
TCCGCACCGGCCTGCGAGAGGCGCGCTGCCCCCGCGTCGCGTGCGGAGCC
GCGGGACGCAGGCCGCCGCGGCCCCCCCCTCCCCCGGCCCCCACCGTCCC
CCCCCCCCCACGGGGCGGGCGGTCCGTGGGGCGGTGCCGCCCTTAGCGGT
CTGCCCGGTCGTCCCTCCGCG

Query= MSMg01no393_o19.b1 MSMg01no393_o19.b1 CHROMAT_FILE:
MSMg01no393_o19.b1 PHD_FILE: MSMg01no393_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:06 2005
         (505 letters)



>mm_chr19_17913012_17913914
          Length = 903

 Score =  855 bits (442), Expect = 0.0
 Identities = 484/502 (96%), Gaps = 8/502 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagcaacttttaatagcatggatgcagatggtcaccctggcaattagcaaatct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 ggaattcagcaacttttaatagcatggatgcagatggtcaccctggcaattagcaaatct 775

                                                                       
Query: 64  ccctgtccctgtccctgcccctgtccctgtccctgtccctctccctcctctctctcccct 123
           ||||||||||||      |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 774 ccctgtccctgt------ccctgtccctgtccctctccctctccctcctctctctcccct 721

                                                                       
Query: 124 tccttcctccctccctccctgcccccttactctggaatctatggttgagaggggtgttaa 183
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 720 tcctccctccctccctccctgcccccttactctggaatctatggttgagaggggtggtaa 661

                                                                       
Query: 184 gaggtctgtccaaagggactggccagtagccagactatacggactctctagagccaagca 243
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 660 gaggtctgtccaaagggactggccagtagccagactatacgga--ctctagagccaagca 603

                                                                       
Query: 244 aaatgcttaggtttctctctttacaaaaataatgccaagtaacaatgagcattttcttta 303
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaatgcctaggtttctctctttacaaaaataatgccaagtaacaatgagcattttcttta 543

                                                                       
Query: 304 gagaattctgagcctaaattccaccaatattttgtgccccacccctgactatgttcagca 363
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 542 gagaattctgagcctaaattccaccaatattttgtgccccacccccgactatgtccagca 483

                                                                       
Query: 364 caatctgataggaatcatataccaggcccttgaaacagatgtgttaaactagccaaataa 423
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caatctgataggaatcatagaccaggcccttgaaacagatgtgttaaactagccaaataa 423

                                                                       
Query: 424 ataaatcaatagaatgcattcccttctgcagcatgtatctgcttttctcatctacctctt 483
           ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 422 ataaatcaatagaatgcatgcctttctgcagcatgtatctgcttttctcatctacctctt 363

                                 
Query: 484 gatctgtaatgtatggacattg 505
           |||||||||||||||| |||||
Sbjct: 362 gatctgtaatgtatgggcattg 341


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 903
Length adjustment: 10
Effective length of query: 495
Effective length of database: 893
Effective search space:   442035
Effective search space used:   442035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)