Query= MSMg01no394_d17.b1 MSMg01no394_d17.b1 CHROMAT_FILE:
MSMg01no394_d17.b1 PHD_FILE: MSMg01no394_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:32 2005
(528 letters)
>mm_chr19_29079514_29080444
Length = 931
Score = 978 bits (506), Expect = 0.0
Identities = 522/528 (98%), Gaps = 5/528 (0%)
Strand = Plus / Minus
Query: 5 gaattcctacatactaaatttcacatgcaaacatgtcatcaaaaccaaagacaaatatct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaattcctacatactaaatttcacatgcaaacatgtcatcaaaaccaaagacaaatatct 672
Query: 65 tacttaagactacacagcaacatatgggaaccaattaaaaatacactatctttagaaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tacttaagactacacagcaacatatgggaaccaattaaaaatacactatctttagaaaag 612
Query: 125 ggttgtaggtaatttcagc--tttttttttttaattaagaaaaaaatcccaaagaggaca 182
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggttgtaggtaatttcagctttttttttttttaattaagaaaaaaatcccaaagaggaca 552
Query: 183 gagtttccctatataactcaacaatccctcattctttaaacttcttcagcttctgcccct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gagtttccctatataactcaacaatccctcattctttaaacttcttcagcttctgcccct 492
Query: 243 cagtgccaggattataagtgtgcaccatatttttctgacagttgggtcatttaagatttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cagtgccaggattataagtgtgcaccatatttttctgacagttgggtcatttaagatttt 432
Query: 303 gggacgcagaatgattatgcaaatgtattttaaactatttcctgtggaatgaatgagtgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gggacgcagaatgattatgcaaatgtattttaaactatttcctgtggaatgaatgagtgc 372
Query: 363 tgaaagtcagagctgataaaagcacaaccctcctttcctatacctaaagacataaaatga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgaaagtcagagctgataaaagcacaaccctcctttcctatacctaaagacataaaatga 312
Query: 423 ctccatgcacagcctcggcccc-tcccccatactctcttttgagaaggtcccagagaacc 481
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 311 ctccatgcacagcctcggccccctcccccacactctcttttgagaaggtcccagagaacc 252
Query: 482 caggctggctttgttcccatctctcntc-atttctgggattataggac 528
||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 251 caggctggctttgttcccatctctc-tccatttctgggattataggac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 931
Length adjustment: 10
Effective length of query: 518
Effective length of database: 921
Effective search space: 477078
Effective search space used: 477078
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_d17.g1 MSMg01no394_d17.g1 CHROMAT_FILE:
MSMg01no394_d17.g1 PHD_FILE: MSMg01no394_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:32 2005
(252 letters)
>mm_chr19_28887838_28888490
Length = 653
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 tgtaattacagatgtgtgctgctgccttcagctttcccatatgggttccagagatcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaattacagatgtgtgctgctgccttcagctttcccatatgggttccagagatcaaac 260
Query: 61 gtaggccaccatgattccacagaaggtgctgagccacctcaccagttctaataaatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaggccaccatgattccacagaaggtgctgagccacctcaccagttctaataaatgttt 320
Query: 121 aaatgtatcttgaattttagaaataactgtaacaaataaaattagacttttactgagaga 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 321 aaatgtatcttgaattttagaaatatctgtaacaaataaaattagacttttaccgagaga 380
Query: 181 tgaatcttcagtcacaccaagagttcagttttcctgatctctgagttgatgggggg-tgg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tgaatcttcagtcacaccaagagttcagttttcctgatctctgagttgatgggggggtgg 440
Query: 240 gggtgg 245
||||||
Sbjct: 441 gggtgg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 653
Length adjustment: 9
Effective length of query: 243
Effective length of database: 644
Effective search space: 156492
Effective search space used: 156492
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
