Query= MSMg01no396_p07.b1 MSMg01no396_p07.b1 CHROMAT_FILE:
MSMg01no396_p07.b1 PHD_FILE: MSMg01no396_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:13 2005
(263 letters)
>mm_chr19_26862444_26863107
Length = 664
Score = 472 bits (244), Expect = e-137
Identities = 259/264 (98%), Gaps = 1/264 (0%)
Strand = Plus / Minus
Query: 1 tctccttcttc-cccccaaagaaaccctctcaagccattcctacacccataccacatgaa 59
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tctccttcctcgaccccaaagaaaccctctcaagccattcctacacccataccacatgaa 405
Query: 60 tgtcaccctatccatgccatctgttgttatcagcaatgataaacacaggtgaggagcaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgtcaccctatccatgccatctgttgttatcagcaatgataaacacaggtgaggagcaac 345
Query: 120 cagaatatccatatggaacggatttgggaacttcaatgacacaatgggatagtcactgac 179
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 cagaatatccatatggaacagatttgggaacttcagtgacacaatgggatagtcactgac 285
Query: 180 tggaaagaacagcacagttctttattggctgacggcatttctctccagagcatgtgtgcg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tggaaagaacagcacagttctttattggctgacggcatttctctccagagcatgtgtgcg 225
Query: 240 actgtgtctatgccaggcttgaag 263
||||||||||||||||||||||||
Sbjct: 224 actgtgtctatgccaggcttgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 664
Length adjustment: 9
Effective length of query: 254
Effective length of database: 655
Effective search space: 166370
Effective search space used: 166370
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_p07.g1 MSMg01no396_p07.g1 CHROMAT_FILE:
MSMg01no396_p07.g1 PHD_FILE: MSMg01no396_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:13 2005
(243 letters)
>mm_chr19_26690414_26691057
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 ttgcc-agaacacagtggcctggccctttgggagtcctggtctgagatgaagagtaatgt 59
||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 201 ttgccaagaacacagtggcctggccctttggaagtcctggtctgagatggagagtaatgt 260
Query: 60 ggcagggagggaaatggggctgcattgcgagtgtctgggtggcagctgggctcttgccca 119
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 ggcagggagggaaatggggctgcattgcgcgtgtctgggtggcagctgggctcttgccca 320
Query: 120 ggcagatttccttcagtgagtttcatcacttggacaatcctatcatctgggattattagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagatttccttcagtgagtttcatcacttggacaatcctatcatctgggattattagc 380
Query: 180 cctgcacctctcccattgtgttcctgggaccatctccttatctatcccacctggtgcttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgcacctctcccattgtgttcctgggaccatctccttatctatcccacctggtgcttt 440
Query: 240 gaag 243
||||
Sbjct: 441 gaag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
