NAAACTATAACTAGTGTCGCTATACGACTCACTATATTCAGAGGATCCGC
GGAATTCTCTAGACTACCAAGAATTACACCAGTAGAATTGGTATGAATTT
GCCAAAACTTCTTTTCTAAATTAGAATCACAAAACTTGAAATGCAACTAC
CATTGTTTCCAGCATGGAACTCCTCTGGGGAGCAATAAGGGACATGTCTG
CTAGGTCTGGGTCATGATAAAGTGAACAGTTGTCAAATGCACTAAAGTCT
TCGAAGCACTTCAAAGACCAGAATCGCCAGTTGTTTGGATTTACTTGATA
AGCTTTGCTTGATGTGTTTTAATAAAACAGAAACATGAAATTAAAATGAA
ACACAAAATGTCCTTACACAGCAGGGACCTTAGTGTTTTATGCTCAGTGC
TGCTCCTTGGGCCATTTGAAAGTGCTTCTCTTCCTGGACTATGATTTTCA
CAGGTAGTAAGTTTACTGGCCATTGTATTTTCCAGTAGGTTTAAAATGTT
TGGGCATTTTCTTCAGAAAATGATAAAAAGTTAAATTTCGAAATAATTGC
TGTAAATTCTTGTGCAACTGTATCTACCCTCAGGTCACTGGTCCATGATA
CACAACAGCAGTTTTCCAGAGATACATTAAATACTAGGTCCAGCTTTCTT
CTGTTTTGTAGCACTTGCTAGAAAAATAACCATCTGTATTACAAACCAAG
ACTAGCCATTCTGGAGCAACTCTACTAAG

NCCCATTGTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCTTTCGTTGAGTTTGGGCAT
CTGTTCATGACTATATTTCCAGCCCTGCTGTGATCTCTTAAAAGTTATAT
TTATTTATTTTGGTGTATGTGTGGAAGTCAGGACAATCTGTCAGAGTCTG
TGGGTTTTGAGTATTGAACTCAGGTTGGTCAGGCTTGTTGGCAAATCCTC
TCCTGTGGAGCCATCTTGTCCCCCACCCCTGCTGTGAATGTTAATAAATC
AGCACTTATCAGGCCTTGGTTTCTTCACCTGTGAGGTGGTGATTTGAACG
TGAACTTCACAATAATGTCAGCCCATAAATGGCACCAGACAGAGAGCAAC
TGCTATTAGCATCATTAAGCTCTTCCTGCCTCACCCTGTTCTCTCTCTCT
CTCTCTCTCTCTCATTCTTCCCGAGAGCTCTACAAGGGACGGAACCACCA
CGCAGTTCACTTCAGTCTGTTCTTCCCCACCCTGCTCACCTCAGGGACTA
CACCAAATGGAATGCCCCTCTCACATAGCTGGACCTGTTTTCACAAAGAC
AGGTGCCTTGCTGAAAGGAAGTTGGAGGAGAAAGCTGTAAATTCCCTCTG
CTTCACCTTCTCCAGCCCTGCTTGCTCAAGAGTTGTGGGGCATTTTATTC
TATCAATCACCCTTAGAGGACACAGCATTCCCAAA

Query= MSMg01no402_a23.b1 MSMg01no402_a23.b1 CHROMAT_FILE:
MSMg01no402_a23.b1 PHD_FILE: MSMg01no402_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:50 2005
         (485 letters)



>mm_chr19_36533879_36534763
          Length = 885

 Score =  891 bits (461), Expect = 0.0
 Identities = 479/485 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   caccagtagaattggtatgaatttgccaaaacttcttttctaaattagaatcacaaaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccagtagaattggtatgaatttgccaaaacttcttttctaaattagaatcacaaaact 260

                                                                       
Query: 61  tgaaatgcaactaccattgtttccagcatggaactcctctggggagcaataagggacatg 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tgaaatgcaactaccattgtttccagcatgggactcctctggggagcaataagggacatg 320

                                                                       
Query: 121 tctgctaggtctgggtcatgataaagtgaacagttgtcaaatgcactaaagtcttcgaag 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgctagatctgggtcatgataaagtgaacagttgtcaaatgcactaaagtcttcgaag 380

                                                                       
Query: 181 cacttcaaagaccagaatcgccagttgtttggatttacttgataagctttgcttgatgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacttcaaagaccagaatcgccagttgtttggatttacttgataagctttgcttgatgtg 440

                                                                       
Query: 241 ttttaataaaacagaaacatgaaattaaaatgaaacacaaaatgtccttacacagcaggg 300
           ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttattaaaacacaaacatgaaattaaaatgaaacacaaaatgtccttacacagcaggg 500

                                                                       
Query: 301 accttagtgttttatgctcagtgctgctccttgggccatttgaaagtgcttctcttcctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 accttagtgttttatgctcagtgctgctccttgggccatttgaaagtgcttttcttcctg 560

                                                                       
Query: 361 gactatgattttcacaggtagtaagtttactggccattgtattttccagtaggtttaaaa 420
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactatgattttcccaggtagtaagtttactggccattgtattttccagtaggtttaaaa 620

                                                                       
Query: 421 tgtttgggcattttcttcagaaaatgataaaaagttaaatttcgaaataattgctgtaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttgggcattttcttcagaaaatgataaaaagttaaatttcgaaataattgctgtaaa 680

                
Query: 481 ttctt 485
           |||||
Sbjct: 681 ttctt 685


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no402_a23.g1 MSMg01no402_a23.g1 CHROMAT_FILE:
MSMg01no402_a23.g1 PHD_FILE: MSMg01no402_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:50 2005
         (486 letters)



>mm_chr19_36711619_36712504
          Length = 886

 Score =  613 bits (317), Expect = e-180
 Identities = 320/321 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccctttcgttgagtttgggcatctgttcatgactatatttccagccctgctgtgatctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctttcgttgagtttgggcatctgttcatgactatatttccagccctgctgtgatctc 262

                                                                       
Query: 61  ttaaaagttatatttatttattttggtgtatgtgtggaagtcaggacaatctgtcagagt 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaagttacatttatttattttggtgtatgtgtggaagtcaggacaatctgtcagagt 202

                                                                       
Query: 121 ctgtgggttttgagtattgaactcaggttggtcaggcttgttggcaaatcctctcctgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtgggttttgagtattgaactcaggttggtcaggcttgttggcaaatcctctcctgtg 142

                                                                       
Query: 181 gagccatcttgtcccccacccctgctgtgaatgttaataaatcagcacttatcaggcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gagccatcttgtcccccacccctgctgtgaatgttaataaatcagcacttatcaggcctt 82

                                                                       
Query: 241 ggtttcttcacctgtgaggtggtgatttgaacgtgaacttcacaataatgtcagcccata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  ggtttcttcacctgtgaggtggtgatttgaacgtgaacttcacaataatgtcagcccata 22

                                
Query: 301 aatggcaccagacagagagca 321
           |||||||||||||||||||||
Sbjct: 21  aatggcaccagacagagagca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)