Query= MSMg01no402_e15.b1 MSMg01no402_e15.b1 CHROMAT_FILE:
MSMg01no402_e15.b1 PHD_FILE: MSMg01no402_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:08 2005
(264 letters)
>mm_chr19_55759596_55760260
Length = 665
Score = 455 bits (235), Expect = e-132
Identities = 253/259 (97%), Gaps = 1/259 (0%)
Strand = Plus / Plus
Query: 7 ggaattccttcct-gccacacactgttttggttcaagcgcttctgagcagacaaggcttc 65
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattccttccaaggcacacactgttttggttcaagcgcttctgagcagacaaggcttc 266
Query: 66 tactgtataggatgtgttctgttcctgcttatgtcagtggatggcgttaggattgtcaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tactgtataggatgtgttctgttcctgcttatgtcagtggatggcgttaggattgtcaat 326
Query: 126 gataacacttatgtcacagcccggagggggactctactgctggaggactccagccaactt 185
||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 327 gataacacttatgtcacggcctggagggtgactctactgctggaggactccagccaactt 386
Query: 186 gcatttctgacacttggtgttggcaagtactgaactctgctgtttagggacgatagcaaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcatttctgacacttggtgttggcaagtactgaactctgctgtttagggacgatagcaaa 446
Query: 246 gatagtggctggtgggcta 264
|||||||||||||||||||
Sbjct: 447 gatagtggctggtgggcta 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 665
Length adjustment: 9
Effective length of query: 255
Effective length of database: 656
Effective search space: 167280
Effective search space used: 167280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_e15.g1 MSMg01no402_e15.g1 CHROMAT_FILE:
MSMg01no402_e15.g1 PHD_FILE: MSMg01no402_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:08 2005
(450 letters)
>mm_chr19_55958082_55958931
Length = 850
Score = 832 bits (430), Expect = 0.0
Identities = 445/450 (98%)
Strand = Plus / Minus
Query: 1 ctttaattatggagtctgctccttaagtcaaactgcattcgatctaattagtaagcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctttaattatggagtctgctccttaagtcaaactgcattcgatctaattagtaagcttag 591
Query: 61 atctcaccttcgtactgaactttatactcgctgaagccaattaagaactatttaaatgaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 590 atctcaccttcgtactgaactttaaactcgctgaagccaattaagaactatttaaatgaa 531
Query: 121 tattaaaaggattcctgtgatcatttctgacatgagagaaaacatgcttttcagggggga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 530 tattaaaaggattcctgtgatcatttctgacatgagagaaaacatgcttttcagggggaa 471
Query: 181 aaaaaagggggtttacacagcatgcctgcatctcacaaaatatttgaattgagccttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aaaaaagggggtttacacagcatgcctgcatctcacaaaatatttgaattgagccttgta 411
Query: 241 ttttatccatgcctcccattctgaaactctgccatccagtgcatttcctaagctccttca 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 410 tttaatccatgcctcccattctgaaactctgccatccagtgcatttcctaagctctttca 351
Query: 301 cgaccaggacccttctttggtcccatctgtcctgagctccgttttaagtgcactcagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cgaccaggacccttctttggtcccatctgtcctgagctccgttttaagtgcactcagagc 291
Query: 361 gatctgttttcagtaacttattaagaggaactgcatagcacacaccctctgcctccattt 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 290 gatctgttttcagtaacttattaagaggaactgcatggcacacaccctctgcctccattt 231
Query: 421 ggataaaccactggtttaagcacatgcagt 450
||||||||||||||||||||||||||||||
Sbjct: 230 ggataaaccactggtttaagcacatgcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
