Query= MSMg01no408_j13.b1 MSMg01no408_j13.b1 CHROMAT_FILE:
MSMg01no408_j13.b1 PHD_FILE: MSMg01no408_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:37 2005
(274 letters)
>mm_chr19_17435802_17436475
Length = 674
Score = 474 bits (245), Expect = e-138
Identities = 263/273 (96%), Gaps = 8/273 (2%)
Strand = Plus / Plus
Query: 5 gaattcaaggca----tttactcaagcatctagtcacacatcacagtagcagagagaaaa 60
|||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggcaagaatt----caagcatctagtcacacatcacagtagcagagagaaaa 260
Query: 61 ggatgtgaaaagttgatagaaaatattatggaaatataaatgtgttaaatataacagagt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ggatgtgaaaagttgatagaaaatattgtggaaatataaatgtgttaaatataacagagt 320
Query: 121 aactatgtccgtgagctttgtctgaatagtaggtacattttgaaatgcatcaacttgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactatgtccgtgagctttgtctgaatagtaggtacattttgaaatgcatcaacttgatg 380
Query: 181 atatctaaggtccctagttatctttaaaacttgggagtttgggagggagggatgctgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatctaaggtccctagttatctttaaaacttgggagtttgggagggagggatgctgagg 440
Query: 241 gctgatagtactttctctagcacccattacaac 273
||| |||||||||||||||||||||||||||||
Sbjct: 441 gcttatagtactttctctagcacccattacaac 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no408_j13.g1 MSMg01no408_j13.g1 CHROMAT_FILE:
MSMg01no408_j13.g1 PHD_FILE: MSMg01no408_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:37 2005
(182 letters)
>mm_chr19_17488938_17489519
Length = 582
Score = 329 bits (170), Expect = 7e-95
Identities = 179/182 (98%)
Strand = Plus / Minus
Query: 1 caagccctaaagcagatatgaaacacacaaggttatgaaaataatcatgtcaatgttgaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 caagccctaaagcaaatatgaaacacacaaggttatgaaaataatcatgtcaatgttgaa 323
Query: 61 agacagtcataagttttttggcattctctctctggagtgtgcaatgtggaataactgtct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 322 agacagtcataagttttttggcattctctctctggagtgtgcaatgtggaataaatgcct 263
Query: 121 ggttttcactggtaaataatagagatgtatttcattaatttctgagtacataccttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggttttcactggtaaataatagagatgtatttcattaatttctgagtacataccttaaaa 203
Query: 181 ac 182
||
Sbjct: 202 ac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
