NNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATCAAATTTTCATTTTCACTGTTACTTTCCAGTCCTGATCCT
ATGCATTAAAGTAGGTTACAGCCCACCAGATAGAACACCCATACACACAA
AGTTAATAATAAATTTAAAAATAAACAAATGAAAATTAAAATCCAAGAAG
TAAAATAGTCTTTGGTACAAGTTAAGTTCCTCTCTAACCACTAAGCAGTT
CTCAGCAACTCTGCAAAGGCAACCATTTGTTTGTATCCTTTCAGAAACAG
TCAATTTCAGATGTTTTCCCTTGAATGGGCCCTTCTACAGTTCTGCCAAT
CTTAAATAGTTCTGCATTTTTCTCCTGACATTATTCTGGGATTCATATTC
CTTTTCTTGGATGGCCCTGGTTGAATGGAATCTCTCCTATCACCTGGATT
GTTCTCACTTCCCTTTTGTAAAATTCTAAGTTGTATCTATAATTTCTGAG
AGCTTTGAAGCAGCCTTTTTAACCTAAATTAATCCATTAATATAAGGCTC
CTATAAAAAAGCAATAATGGTCCACTTATTGATGAGGCAAAAGTTGTGGA
TTCACTATTAGGGTATTTTCTCATTTCTGGTCATANNAGAAAGATTCCTC
ACATATTGAGCCCCTTTTTCCTACAGAGAGNTGCCATCTTGAGTAAGGGG
CAAATTAGTTAAAAGATGTTGGATGTCAATGAGTTTTTCAACCTGAAGGA
TAAGAACCCCGA

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGGCTCCTGGCTTTGTGAATATTACC
CACTGTTTGGCCTCTAGGAGAGACAGCAGAGCTTTAAAGTGGTTGGTCAC
AGGACTGTGCCTAGCCACAGCTCCTGGAGCTCAGGGTGAGTTGTTGGCTC
AGCTCTACTGAAGGAGTCATTGTCCCTGAAAGACCTATGACTAGACTGAG
GCTTGCGGGAACTGTGAGCATGCCGTGTGGTTTGGGTTGCCAGTCATTTG
AGCAGAACCACCTGGTTTACCTTTGGGGAGAGGTTCTGTTCCCTCCTCTA
GTTCCCCCTTCCCTGGACTGGGAGCTGTTTGGCTTGTCTTTCTTCATTTT
CAATGCACACCTTGGCTCTACCCTTCATTTTGTGGGTTTATAAAGTGCTT
TTTCTTTCTTTGGAGTGAAATCTACTTTTTTCTTTTTAATAGATTTATTT
CACTATCTTTAATTATGGATCTGGGTGTGGGTGTGTGTACATTANAGCAG
GTTTTCTGCAGAGGCCAGAAAAGGTATCAGTTCTCTGGGGCTGGAGTTAC
AAGAGATTGTGAGCACATGCATGCTGTGACCTGAACTCANGTCCTCTGCA
AGGAAATTGTGTGCTTGGAGAGATCAATCCAATAAAACTGGAGTCCGTTC
CTTCTCAACCATTTGGGCTAACATTGGACAAGCATACTTTGCCAGGG

Query= MSMg01no411_l04.b1 MSMg01no411_l04.b1 CHROMAT_FILE:
MSMg01no411_l04.b1 PHD_FILE: MSMg01no411_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:50 2005
         (583 letters)



>mm_chr19_15623510_15624492
          Length = 983

 Score = 1112 bits (575), Expect = 0.0
 Identities = 578/579 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatcaaattttcattttcactgttactttccagtcctgatcctatgcattaaagt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcaaattttcattttcactgttactttccagtcctgatcctatgcattaaagt 264

                                                                       
Query: 65  aggttacagcccaccagatagaacacccatacacacaaagttaataataaatttaaaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggttacagcccaccagatagaacacccatacacacaaagttaataataaatttaaaaat 324

                                                                       
Query: 125 aaacaaatgaaaattaaaatccaagaagtaaaatagtctttggtacaagttaagttcctc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 aaacaaatgaaaattaaaatccaagaagtaaaatagtctttggtacaaggtaagttcctc 384

                                                                       
Query: 185 tctaaccactaagcagttctcagcaactctgcaaaggcaaccatttgtttgtatcctttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctaaccactaagcagttctcagcaactctgcaaaggcaaccatttgtttgtatcctttc 444

                                                                       
Query: 245 agaaacagtcaatttcagatgttttcccttgaatgggcccttctacagttctgccaatct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaaacagtcaatttcagatgttttcccttgaatgggcccttctacagttctgccaatct 504

                                                                       
Query: 305 taaatagttctgcatttttctcctgacattattctgggattcatattccttttcttggat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaatagttctgcatttttctcctgacattattctgggattcatattccttttcttggat 564

                                                                       
Query: 365 ggccctggttgaatggaatctctcctatcacctggattgttctcacttcccttttgtaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggccctggttgaatggaatctctcctatcacctggattgttctcacttcccttttgtaaa 624

                                                                       
Query: 425 attctaagttgtatctataatttctgagagctttgaagcagcctttttaacctaaattaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attctaagttgtatctataatttctgagagctttgaagcagcctttttaacctaaattaa 684

                                                                       
Query: 485 tccattaatataaggctcctataaaaaagcaataatggtccacttattgatgaggcaaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tccattaatataaggctcctataaaaaagcaataatggtccacttattgatgaggcaaaa 744

                                                  
Query: 545 gttgtggattcactattagggtattttctcatttctggt 583
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gttgtggattcactattagggtattttctcatttctggt 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no411_l04.g1 MSMg01no411_l04.g1 CHROMAT_FILE:
MSMg01no411_l04.g1 PHD_FILE: MSMg01no411_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:50 2005
         (485 letters)



>mm_chr19_15783021_15783905
          Length = 885

 Score =  932 bits (482), Expect = 0.0
 Identities = 484/485 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggctcctggctttgtgaatattacccactgtttggcctctaggagagacagcagagctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggctcctggctttgtgaatattacccactgtttggcctctaggagagacagcagagctt 626

                                                                       
Query: 61  taaagtggttggtcacaggactgtgcctagccacagctcctggagctcagggtgagttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaagtggttggtcacaggactgtgcctagccacagctcctggagctcagggtgagttgt 566

                                                                       
Query: 121 tggctcagctctactgaaggagtcattgtccctgaaagacctatgactagactgaggctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggctcagctctactgaaggagtcattgtccctgaaagacctatgactagactgaggctt 506

                                                                       
Query: 181 gcgggaactgtgagcatgccgtgtggtttgggttgccagtcatttgagcagaaccacctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcgggaactgtgagcatgccgtgtggtttgggttgccagtcatttgagcagaaccacctg 446

                                                                       
Query: 241 gtttacctttggggagaggttctgttccctcctctagttcccccttccctggactgggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtttacctttggggagaggttctgttccctcctctagttcccccttccctggactgggag 386

                                                                       
Query: 301 ctgtttggcttgtctttcttcattttcaatgcacaccttggctctacccttcattttgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgtttggcttgtctttcttcattttcaatgcacaccttggctctacccttcattttgtg 326

                                                                       
Query: 361 ggtttataaagtgctttttctttctttggagtgaaatctacttttttctttttaatagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtttataaagtgctttttctttctttggagtgaaatctacttttttctttttaatagat 266

                                                                       
Query: 421 ttatttcactatctttaattatggatctgggtgtgggtgtgtgtacattanagcaggttt 480
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 ttatttcactatctttaattatggatctgggtgtgggtgtgtgtacattagagcaggttt 206

                
Query: 481 tctgc 485
           |||||
Sbjct: 205 tctgc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)