CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTTATATCTGTACCCCATTTTAAAAATAGGGTTATTTGGT
TCTCTGGAGTCTCACTTCTTGAGTTCTTTGTATATACTGGGCATTAGTCC
TCTCTCAGATATAAGGTTGGTAAAGATCTTTCCCAATATGTTGGTTGCCA
TTTCATACTATTGACAATATTCTTTGCCTTTCAGAAGCTTTGCAATTTAT
GAGGTCCCATTTGTCAACTCTTGATCTTAGTGCATAAGCTATTTGTGTTC
TGTTCAGGAAATTTTCTCCTATGCCCATGTGCTCTAGGATCTTCACCACT
TTTTTCTTCTATTAGTTTCAGTGTATCTGTAGCTTCTCCATTGCTTGTGG
GATTGTAAGCTGGTACAACCACTCTGGAAAACAGTTTGGCAGTTCCTCAG
AAAATTGGACATAGTACTACCTGAGGACCCAGGTATACTAGTCCTGGGCA
TATACCCAGAAAATGCTCCAACATGTAATAAAGACACATGCTCTACTATG
TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATG
TCCCTCAACAGAGGAATGGATACAGAAAATGTACATTTACACCATGGAGG
ACTACTCCCCTATTATAAACAACGAAATTATGAAATTCTTTATGAAAAGG
AGGATCTGGGGGAAATCCTCCCGAGGGGAGGGAACCCTTCCCCAAAAAAA
CCCTTTTTATTGATTCCCCGGT

NCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAACACAAAGATTTAATCTCTGACAT
TCCATTTTAGAGAGGAAGAAACTAAAATAGACAGATGATTTCTTTTCTTC
GGGATCCTACAGTAACAAATCATCGAAGCTACATATAAAAATCTAGGTAC
TGTAACTCTTGGAATCCTTGGCCATTATGTCATCTTTCTCCCTTTTCTAT
CAAAGGGGTAATTTGAAAATGTCCTACCATTATCAATAATTTACAAATGA
TGATAAGAAGGCTTTGCGTAGACATATTTCCTAACATATTTTATGCTCAC
ATGCTGAAATAAAGCCCAGGGGGCACACTATTAACTATTAGTCTCTAGTA
TAATTTCATAATACTCTTTTTCATGGGGTTACAGCTTCACTAATCATTAC
CTACTAAGTTCTATAGGTATTATCTTTGTTGGTCACTGGAAAATTATTTT
TCTTGTGACCACCTAGATCCTAAACAAAAACAAAAGTCCTATCCTTTGGC
CCAGCTGTCAGATTAAAATAGAGTAATATTGTATGTACCTACAATTGCGT
GGTGCTCTTGCCTATACCACAATGGAGTAAATGCCCATTTATCTTCTCAC
ATATGAATGGGGGGGAATGGGGCTTTTCACCCNCNCCCAAAACTAAACCC
CCCCGCGTCTTCTTACTCTCTACTTCCCTACCCCCCATATCCCATCCCTC
CCCTTTTCCCCCGATACTTAACTCGATCCCTTTTTATGCCTTTGC

Query= MSMg01no412_f22.g1 MSMg01no412_f22.g1 CHROMAT_FILE:
MSMg01no412_f22.g1 PHD_FILE: MSMg01no412_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:42 2005
         (433 letters)



>mm_chr19_19610990_19611822
          Length = 833

 Score =  799 bits (413), Expect = 0.0
 Identities = 428/433 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacacaaagatttaatctctgacattccattttagagaggaagaaactaaaatagacaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aacacaaagatttaatctctgacattccattttagagaggaagaaactaaaatagacaga 574

                                                                       
Query: 61  tgatttcttttcttcgggatcctacagtaacaaatcatcgaagctacatataaaaatcta 120
           ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 573 tgatttctttttttcgggatcctacagtaacaaatcatggaagctacatataaaaatcta 514

                                                                       
Query: 121 ggtactgtaactcttggaatccttggccattatgtcatctttctcccttttctatcaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggtactgtaactcttggaatccttggccattatgtcatctttctcccttttctatcaaag 454

                                                                       
Query: 181 gggtaatttgaaaatgtcctaccattatcaataatttacaaatgatgataagaaggcttt 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gggtagtttgaaaatgtcctaccattatcaataatttacaaatgatgataagaaggcttt 394

                                                                       
Query: 241 gcgtagacatatttcctaacatattttatgctcacatgctgaaataaagcccagggggca 300
           | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gagtagagatatttcctaacatattttatgctcacatgctgaaataaagcccagggggca 334

                                                                       
Query: 301 cactattaactattagtctctagtataatttcataatactctttttcatggggttacagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cactattaactattagtctctagtataatttcataatactctttttcatggggttacagc 274

                                                                       
Query: 361 ttcactaatcattacctactaagttctataggtattatctttgttggtcactggaaaatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttcactaatcattacctactaagttctataggtattatctttgttggtcactggaaaatt 214

                        
Query: 421 atttttcttgtga 433
           |||||||||||||
Sbjct: 213 atttttcttgtga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space:   349376
Effective search space used:   349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)